Gene Pisl_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1304 
Symbol 
ID4618284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1181530 
End bp1182240 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID639784393 
Producthypothetical protein 
Protein accessionYP_930810 
Protein GI119872803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.162924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCT TACACGGCGC CGGCCCTCTT CGGAGGGGCT CGGGGGATCG TCTCCTTATG 
CCAGACAGGC TGGAGTTTGC GCATGGGATA ATCGAGGAGG TGTTTCCTAA GTACGGGTTG
GGGAGGTACT TCATAAAGCA GGGAAAGGTG TTCTGGCGTG ATGTGGCATT TCACAGAGCG
GTCCCCCTTG ACGCTCAATT GAGAGTTGAA AACGAGAGAG ACGTGGGCAG AGCGGTCTTC
GTCGACCTCA AGAGTGGCGT TGTTAGAGTG CGGCGACTAC AGAGGACGTT CACAGTTCGT
CTTAGGAAAC AGACCGTCGA GTGGATTAGG CGGAGGTTGG AAGAAGACGC CAAGCTCAAG
TTGGCGTTTC TTGGCATAGA GAAGCGGAAG GACAGGAAGG AATTAACATA CGGAAAGCTC
TATATAGCGC TTGTCTTTGC TAGAGAGGCC CAACCGATCA TGTCGAAAGC TATCGTCGCC
GTGTATGTCA ACCGCCTAGA CCACGGCATG GTGATCGGCG TTGTAAAAGA CCGAAAAATT
GTGAAACGAT ATAGGATGAG AGAAGTGGGA AACAGACATA TGCAGTGTCT CACTCGTGGC
CTCAACGACG CACGTAATAA CATCCCCATA CACTGGGCAA AGAGGAGGTA TTGGGAGTTG
TTGGAAAAGA CTAAACAACC CGCTTTCCCC CGGAGACCAC CACACTTTTA A
 
Protein sequence
MPLLHGAGPL RRGSGDRLLM PDRLEFAHGI IEEVFPKYGL GRYFIKQGKV FWRDVAFHRA 
VPLDAQLRVE NERDVGRAVF VDLKSGVVRV RRLQRTFTVR LRKQTVEWIR RRLEEDAKLK
LAFLGIEKRK DRKELTYGKL YIALVFAREA QPIMSKAIVA VYVNRLDHGM VIGVVKDRKI
VKRYRMREVG NRHMQCLTRG LNDARNNIPI HWAKRRYWEL LEKTKQPAFP RRPPHF