Gene Pisl_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1303 
Symbol 
ID4618346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1180822 
End bp1181292 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content39% 
IMG OID639784392 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_930809 
Protein GI119872802 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.213126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA GACGGCGCGG GATTTTCAAA GGCGTTGTTC TCTATATCTT AAAGTCTAAA 
CCACTCAGTG GGTATGAGAT ACTGAAAGAA CTTAGTAAAT TGACGGCGGG TAGATTCGTG
CCGTCTCCTG GCACTCTCTA TCCGCTTCTT TCATATTTAG AATCTGAAGG ATTTATAGAA
GCTAGAGAGA CGTATGTAGG TAAAAGGAGG AAAAAGATAT ACGCCTTGAC GCAACGTGGA
GAGGAGTTCT TAGGTAAACT CTTAGAAGAC GAAGAATTTA GAAGTCTCAT ACAGACATTA
GAAAGCGGCG GTGTTGAAGA CGATTTATTA GTGGCTATAA GAGACGAGCT TGTATACATA
GACGAAGTTT TTGACGAAGT CGAGGGCAGA GATAAAGCAG TTCTAGAGGA AATCTATATA
ATCTTAAGGC GTCTAGAAGA CAAAGTTTTA GCTAAACTAA AGCAAATATG A
 
Protein sequence
MFKRRRGIFK GVVLYILKSK PLSGYEILKE LSKLTAGRFV PSPGTLYPLL SYLESEGFIE 
ARETYVGKRR KKIYALTQRG EEFLGKLLED EEFRSLIQTL ESGGVEDDLL VAIRDELVYI
DEVFDEVEGR DKAVLEEIYI ILRRLEDKVL AKLKQI