| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1288 |
|---|
| Symbol | |
|---|
| ID | 4617281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1169334 |
|---|
| End bp | 1170095 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639784377 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_930794 |
|---|
| Protein GI | 119872787 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATTTAA ATACAGATCG ACATTTCCAC GTGTCTCTTG TAATTAGGAA CGTAACCGTC
TTCCGTAGTG GAAAGCCAAT TGTAGAGGAT GTGACATTTT CAGCGAGTCG AGAGTTTGTG
CTTGTGGCTG GCCCCAATGG CGCTGGTAAA ACGACGTTGT TTCTAGCAGT GTTGGGTCTT
CTACCTTACA GAGGAGAGAT ATGTGTTGGA GGAGTTTGCG ATATCGAACG TACGAGAAAA
GTTGGCTATG TGCCGCAAGC GATTAGAGTC GAGACTAACG CAACTGTGTG GGAATACGTC
TATCTCCCTG CCAAATTTAG AGGTGTGAAA AATGTAGAAA AAACTGTGGA AGAGGCCTTA
AAAACTGTAG AGCTTTTCGA ACTCAGAGAC AAACCCATAA CTACCCTCTC GGGAGGCCAG
CTACAAAGAG CGGCTATTGC AAGAGCGCTT GCAGTCGGCG GGGAGGTTCT CCTATTGGAC
GAACCCTTGG CAAACGTCGA CCCCCAAGGC CGTGTGGAGC TTCTAGCTTT ATTAAGAGAG
TTAAAGAGAG AGAGGACTAT ACTCATGACG TCTCACGAAC TTACGCTTCC CACAAATCTC
GCCGATAAAA TACTCTTATT AAACAGAAAA CTTATAGCCT ACGGCCCGCC AAGTGAGGTA
TTAAAAGAAG AGGTGTTATA CAAAGTCTAT CGCTATGTCC GCATAGCCCA AACCCCCACA
GGTTACGTCT GTGTTACTGA GGACTATGCG CATCCCCATT GA
|
|---|
| Protein sequence | MHLNTDRHFH VSLVIRNVTV FRSGKPIVED VTFSASREFV LVAGPNGAGK TTLFLAVLGL
LPYRGEICVG GVCDIERTRK VGYVPQAIRV ETNATVWEYV YLPAKFRGVK NVEKTVEEAL
KTVELFELRD KPITTLSGGQ LQRAAIARAL AVGGEVLLLD EPLANVDPQG RVELLALLRE
LKRERTILMT SHELTLPTNL ADKILLLNRK LIAYGPPSEV LKEEVLYKVY RYVRIAQTPT
GYVCVTEDYA HPH
|
|---|
| |