Gene Pisl_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1279 
Symbol 
ID4616304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1161123 
End bp1162394 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID639784369 
Producttransposase, IS605 OrfB 
Protein accessionYP_930786 
Protein GI119872779 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG TATACAGAAC GTTGAAGGTG GAAATCCCCT GGCGTCTCAT CGAGGAGAGG 
CCAGACGTCT TAGACACTGT AACGCGTATG TATTTAGCCG TCGGGGAATA TGTAAAGAGA
CTGCTAAAGG AGTTGACAGG AAAGGAAGAA CCCAGACTCA CGGCGGAGGA GCTAAACCGT
CTGCTCACTC CCGACAGGCG GGAGTTTGCG CGCCGGACTA TTGAGGAGGT GTTTCCCAAG
TACGGTCTCA AGAGGTACTT CGTAGATCAA GCCAAGGTGT TCTGGCGTGA TGTCGTGTTC
TACCGGGCGG TTCCATTAAA CGCCCAATTG AGGGTTGAGG ACGAGAGAGA CATGAGTATG
GCAGTCCTCG TTGACCTAAA GAGCGGCGTA GTCAGAGTGC GTAAGCTCGG CATACCGCCT
TTCGCCGTCG AGTTGGAGAA GAGCAACGTC GCCTGGATTA GGCGGAGGTT AGAGGAGGGC
GCCAGACTCA AGTTGGCATT CGTCAGCGTT GATGTAAAGA GAGGAAAAGA TCCTACTTAC
GGCGGCCTGT ATATCGCCCT TGTGTTTGCT AGAGAGGTGA CGCCGGTGGA GCCCAAGGCG
CTTGTCGTTG TTGATGTCAA CCGCCTTGAC CACTACATAA AGGTCGGCCT TGTGGCCGAC
GGGAGGGTCG TGGAGTTGTG GAAGTTGCCC AAGAAGGAGC GTATCCAAAA GTTGGAGAGG
ATACACATCC ACATAAGCCA ATTAAGCAAA GCCCTCGCAC GTGTAGACGA GGACATAGAC
CCACGCAGAG CGTTAGACCT CCAGAGACAA CTGTGGAAGC TTGAGACAAA GCGCTATGAC
ATAATCCGAG ACATCGTGGT AGACGCGGCG CGTGAAATCA TAAAGTTGGC GAGGGAGCAC
CAAGCCGCGA TCGTGGTGGA CACGGTGGAG GACGGCACGT ACCGAGAGCT GAAGGAGGGG
AACTGGAGTG GAGTGAAGAA GCACCTCCTC GACGGTCTCG GCCAGCTGAG GAGGAGGTTG
AAGGAGTCGG CGCAGTGGTA CGGCCTGCCG TATCTGGAGG AGAGGTTGTA CTCAGCCGTC
TGCCCGAAGT GCGGCGCGAA GATGAAAGAG CTGAATAACA GACGGATGCA TTGCCCCGCC
TGCGGCTTCA GAGCGCACCG CGACAACGTG CCCATGATAT GGGCAGAGAA GAGATACCAA
GAGCTGATAG AGAAGACAAA ACAACCCGTT TTTTCCTCCG TCCCAACAGC CACCACATTT
TTAACTTTGT AA
 
Protein sequence
MNQVYRTLKV EIPWRLIEER PDVLDTVTRM YLAVGEYVKR LLKELTGKEE PRLTAEELNR 
LLTPDRREFA RRTIEEVFPK YGLKRYFVDQ AKVFWRDVVF YRAVPLNAQL RVEDERDMSM
AVLVDLKSGV VRVRKLGIPP FAVELEKSNV AWIRRRLEEG ARLKLAFVSV DVKRGKDPTY
GGLYIALVFA REVTPVEPKA LVVVDVNRLD HYIKVGLVAD GRVVELWKLP KKERIQKLER
IHIHISQLSK ALARVDEDID PRRALDLQRQ LWKLETKRYD IIRDIVVDAA REIIKLAREH
QAAIVVDTVE DGTYRELKEG NWSGVKKHLL DGLGQLRRRL KESAQWYGLP YLEERLYSAV
CPKCGAKMKE LNNRRMHCPA CGFRAHRDNV PMIWAEKRYQ ELIEKTKQPV FSSVPTATTF
LTL