Gene Pisl_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1259 
Symbol 
ID4617662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1145459 
End bp1146838 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content46% 
IMG OID639784350 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_930767 
Protein GI119872760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4986] ABC-type anion transport system, duplicated permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGTA TTGCCATCGC CGTTTTAGCT CTCTTAGCGA CCTTTGGGAG GATGGCCTTG 
GCTTTGTTAT CTACTGTGGC TATAGCCTAT GCCTTGGCAT ATGCTATGTA CAAATCTAGG
CGCGTTGAGG CAGTCTTACT GCCTCTTCTA GATGTGTTAC AGTCGGTTCC TATACTGGGG
TTTTTCCCCA TTGCCCTATA TGTCTTTGTT TTCATAATGC CGCAGATTGG TGCAGAATTG
GCGGCTCAGT TTCTGATTTT TACATCTATG GCGTGGAACA TAATCTTTGG GATATATCAA
AGTTTCAAAA CTCTACCTAG AGAACTTATT GAGATGTCTC AAGTATATCT CACCGAGAGA
TTGGCGCTGG CCCATGTGTT TCTACCCGTT GCTTTAAGAA GCGTTTATTA CAACGCCGCC
GTGTCTTGGT CAAACGCCTT CTTTTTTATA ACTGCTTCAG AAGTGATAAC TCTGGGAACT
GAGGTAAAAC TGTTCGGCAT AGGTAGCTTT GTTGTAGACG CTTTTGAAAA AGGCGACACT
ACAGCAGCAT ATGTGGGAAT AGCGATAGGA ACCGCCGGAA ACATTGCCCT ATATTTATTC
CTCTGGCGTA GGTTAATAAG AGAGATGCCA CAGCCGCCCT ACGTCCTTTC CAAAATACTT
TCCGTCTGGA TGAAATACGG CATATATGTG ATATTTACAG CTACTATGTT GTTATCTGCC
GTATCTATTT ACTATATCTT ACGTAATTTT ACCCCAGCGT CACAACAGTG GGAACTTTTA
TCATACCTGG TGAATTCCCT AATAGACGTC TTGCCGACCC TAGCTAGAGT CGTTATGACG
CTTACTATCA GCGCCTTGGC TGGTCTTCTC TCTGTAGCTT TAGTTGTGAA GAATCCACAA
CTAGAGACTA CGGTGTTTAT CGCTCTTTCG ATTCTATCGT CGATACCGGC TGTATTTTTA
TACCCGCTGA TAGGATCTGT GGTGAGGGGC GAAGCTCTCT CCGTGGCCCT CTTACTGCCT
GGTAGCATTG TATACACAGT GCTAAACGCT GTTGCCGCTT GGCGCGACGT GCCTAAAGAT
CTAGCAAGAG CCTACGGCAT TGGAGGCGCT GTCTATTTCA TCCACATCCT AATACCGGCT
ACACTGCCGT ATCTAATAAC CGGCTTATTA ACCGCATGGG GCGGCGCGTG GAATGCCACA
ATTGTCGCAG AGTCTCTTGC AAATGTAAAC GGACTGGGGG CATATATGGC GCAAGTCGCG
CAACTCGGCA ACATACCGGC GCTTATAATC TCAGTTATTG TTATGAGCGG CGTGGTAATT
ACTGTAAACA AATTAGTGTG GAAAAGGCTC TATAATCTGG TGGCGCAATG GCACTCATAG
 
Protein sequence
MESIAIAVLA LLATFGRMAL ALLSTVAIAY ALAYAMYKSR RVEAVLLPLL DVLQSVPILG 
FFPIALYVFV FIMPQIGAEL AAQFLIFTSM AWNIIFGIYQ SFKTLPRELI EMSQVYLTER
LALAHVFLPV ALRSVYYNAA VSWSNAFFFI TASEVITLGT EVKLFGIGSF VVDAFEKGDT
TAAYVGIAIG TAGNIALYLF LWRRLIREMP QPPYVLSKIL SVWMKYGIYV IFTATMLLSA
VSIYYILRNF TPASQQWELL SYLVNSLIDV LPTLARVVMT LTISALAGLL SVALVVKNPQ
LETTVFIALS ILSSIPAVFL YPLIGSVVRG EALSVALLLP GSIVYTVLNA VAAWRDVPKD
LARAYGIGGA VYFIHILIPA TLPYLITGLL TAWGGAWNAT IVAESLANVN GLGAYMAQVA
QLGNIPALII SVIVMSGVVI TVNKLVWKRL YNLVAQWHS