Gene Pisl_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1256 
Symbol 
ID4616621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1143472 
End bp1143765 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content49% 
IMG OID639784347 
Producttranslation initiation factor IF-1A 
Protein accessionYP_930764 
Protein GI119872757 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT TTAGAACGCC CGGAGAGGGG GAGGTTCTTG GCAAAATTGT TGAGATGCTT 
GGCGATGGTA GGTTCAAAGT TATTTGCGCA GATGGTCAGA TTAGAGTAGC GCGGCTCCCC
GGACGGTTGA GAAAAAGACT GTGGCTTAAG GCGGGCGACT ACGTGATAGT GGCTCTATGG
GATTTCGACC CGGCTAAAGG CGATATTGTA CATAAATATG AGAAAAGAGA CATAGAGGAA
CTCAAGCGGA GAGGTTATGC GGAGACCATA GAAAACCTTG ACCGTTACGT GTGA
 
Protein sequence
MSEFRTPGEG EVLGKIVEML GDGRFKVICA DGQIRVARLP GRLRKRLWLK AGDYVIVALW 
DFDPAKGDIV HKYEKRDIEE LKRRGYAETI ENLDRYV