Gene Pisl_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1255 
Symbol 
ID4616593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1142678 
End bp1143409 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content46% 
IMG OID639784346 
Producttransposase, IS605 OrfB 
Protein accessionYP_930763 
Protein GI119872756 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGT ACTATCTACG TTGTGATGTA GGTAGATTAA GAGAGATACT AGGCGGCGAA 
TATAGAATAT TTGAGCTTGG GAGTGTTGTT AAACTAATCG AAAGTTTCGT AGCTATATAT
GCCAGCGACC TCCCCCTCTG TGTTTATAAA AGTTGGAGAA TGACATATGC AGACCCAATG
CAATTTGGGA TAGCCAAGGC GGAGGTTCTC CTTAGGAAAG ATGGCGCAAT AGTTAGACTT
ATTAGACCAG ATGAGAAGAT AGGTCTTCCC GAACTTGTCG AAAGCACTCC ATTTGTAGTA
CATGCGATGG ACGTAAATGA AAACGGCGTT GTATACCGCG TATTTAGAAT GGGCGGCTAT
GTAGAACTCG CCGCAAGGGG GGTAGCCGGG GGGATAAAAG AGGCCTTTTA CCCCAAGAAA
GGCGTAAATA TCCTAGTGGT AGACCTCCCA CTTACGCAGA AGTTTCAACA TCTACTGACA
GAAGTGTTAG AGCTGGCTAG AGAGCACTAT GTTGAGCTAC ATACGACAAT GATCTCAGAC
GTCTGTCCGC TCTGTGGAGG AAGAATGGAG AGACGTGGGA GACTTGTCAG ATGTCCTGTT
TGTAAAATCC AGTTAAGTAG AGATGTCAAC GCCGTGTGGA CTCTCGCAAG GAATATAGTT
AGGAGACTCG GCCGGGAGCA ACAGTTAGCC GAACTCAGGG AGATCTTCCG GCTCTACTAC
CCAAATGTGT AG
 
Protein sequence
MFTYYLRCDV GRLREILGGE YRIFELGSVV KLIESFVAIY ASDLPLCVYK SWRMTYADPM 
QFGIAKAEVL LRKDGAIVRL IRPDEKIGLP ELVESTPFVV HAMDVNENGV VYRVFRMGGY
VELAARGVAG GIKEAFYPKK GVNILVVDLP LTQKFQHLLT EVLELAREHY VELHTTMISD
VCPLCGGRME RRGRLVRCPV CKIQLSRDVN AVWTLARNIV RRLGREQQLA ELREIFRLYY
PNV