Gene Pisl_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1245 
Symbol 
ID4617817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1129330 
End bp1133043 
Gene Length3714 bp 
Protein Length1237 aa 
Translation table11 
GC content45% 
IMG OID639784336 
Productreverse gyrase 
Protein accessionYP_930753 
Protein GI119872746 
COG category[L] Replication, recombination and repair 
COG ID[COG1110] Reverse gyrase 
TIGRFAM ID[TIGR01054] reverse gyrase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000744005 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTGC CACATGTGGT ATATCTTCAC AGCTGTCCTA ACTGCGGTGG GCCTATCACA 
TCTGATAGAC TTGCTGCCGG TCTTCCCTGT TATGAATGTC TTCCAAAAGA GCCTCAGGCA
AAGGCTATAG GTGAAGTTGT AGAGGCTTTA CGTAGGAGAA AGGCGTTAAA GGAATTAGCA
CGGGTTGCAG AGTATCTACG GGAGTACAAT AAGTTTTCGG CGTTTTTCAA GGAAATAATC
GGCTACGAAA TGTGGGGTGC CCAGCGACTT TGGGCAAGGA GATTGGTCAG AGGAAAAAGT
TTTGCAATAG TAGCGCCAAC TGGGTCTGGA AAAACCACCT TTATCCTAGT GGCAACTCTA
TATATGGCGC TGAGGGGGAA AAAGACGTTG TTAATATTTC CCACATCTGC TTTAGCACAT
CAGGCGTATA AAAAATTGAT GTCTTTTGCT GAAAAAGTCG GTGCGTCTGT TAAAACATTG
GCGTATCATT CTCTACTCAC CGAGAAGGAA AAAGACGAGG TTCTAGCAGC AATTGAGAGG
GGAGAATTTG ACGTTTTAAT TATAACATCG GCATTCCTCC CCCGCCGCTT TGACCTACTT
AGTAGGTATA AATTCGAATT CATCGCTGCA GATGATGTCG ATAGTATACT CAGAGCGACT
AGCAAAAACA TTGATAGAAT CTTAAAACTG CTAGGCGTGT CGGATGAGGT TTTAAAAACC
GCACTAGACA TAATTAGTCT AACTAAACAA ATTAGAAAGG CTGAAGTCGT AGGCGATTTA
AAAGAGGTGG AGCGTCTCGA ACAAGAGCTG TCCTCTGCCA GGGCGAAACT ACAGGAGGAG
GTACGTAAGC TAAAACTTGG CATCTTTATA GCATCTGGAG CTTTAGCTAA AGCTAGGAGA
ACTACACGCC TACTTTTATT TAGAGAGCTT CTTGGATTTG ATGTAGGCGG CAGAGCCGAA
GGTCTTCGTA ATGTGACAGA CGTCTATATA GATATGTCAC AAGATGTAGT AATGCAGACA
ATAGAAATTT TAAAGAGATT GGGCCCCGGC GGAATTGTTT ATGTACAAGA CAGAGAGTTG
GGGATAGCCA TAGCGGAGAA AGCTAAAGAA CGGGGCCTTT CTGTAGAACA TTTCTTCAAG
CCCCGCCGCG GCATATTAGA GAGTTTTGAA AAGGGGGAGA TCTACGCATT GGTGGGACTG
GCGTCGCCAC GTTCCCCACT TGTGAGGGGG ATAGATTTAC CACATGTAAT TAGATACGTC
GTCTTCGTCG GAGTGCCGAA GTATAGATTT AGAGTTAGAC TTGAGGAATT TTCAATACCA
GCATACCTCA CCTTTTTATA CAACGTACGA ACTGTTTTGA CAGGCGAGCT AAGATATAAA
GCCGACAGAT TAATAGGCCA GCTTAAACGT CTTGCCCCCT ATGCAATAAG TGTACAAGAG
GCGCTTAGAA AGGCTTCTGA GGGCGCAGAG CTTACAGGCT TTGATAGACA TGTAGTAGAT
GTTGTAAAAT CAGCCGTCGA TTTCGTAAAT AATCTACTTA TGAGAGACGA TTTGAGACAA
GCTATAGAGA GCTCCACCGA GGTAAAGCTA ACGCGTATAG ACGACGAGTT CTACGTCCTT
GTGCCAGATG TCACAACCTA TATCCAAGGC AGTGGGAGAA CTTCACGTCT TTACGCAGGC
GGGCTTTCTA AAGGCCTTAG CGTTGTCATC GTAGACGACA AAAAAGTCTT CCACGCCCTA
AAGAGGGAGT TAAAACTTAG GTTTGACGAG GCGGAGTTTA AACATATAGA TGAGGTCGAT
CTAAACGCCG TACTTGCTGA AATAGATAAA GACAGAAAAG CCATCAGAGA TATCTTAGAG
GGGAGAGTTA CCCCGGCAAC CAAAGGCGTT GAGCTACTAA AGACTGTGCT TATGATTGTA
GAATCTCCCA CAAAGGCCAG GACAATAGCA AACTTCTTCG GTAGGCCAAG TCTGATAGTT
ACAGATGGCG TTCCCATATA TGAGGTTTCA ACTGGTGACG CTGTCCTTAT GATTACTGCG
TCGCTTGGCC ATATATATGA ACTACCTACC TCGCTCAAGA GAATAGACTC TAGACAACGC
GAGATTTTAG CCAAGTGGTT TGGAGAGTTT AAATATGACA GTTACAATGG CGAGGAATAT
GCGGTAATTG TAAAAGAGGG CAGCTTCATT CCAGTTTATA ACAAGATCTG GAGATGTCGC
AATGCCGTAT ATATAGACGA CACAGATGTA CCCCCAGACT GCAAACCGCT TGATGTCTTG
TCGGCAATTA GAAACATAGC TATAGAGGTA GATACAGTAC TCATCGGCAC AGATCCAGAC
TCAGAAGGTG AAAAGATAGC ATTTGATTTA TACCTCGGGC TAAGGCCTTA CGTCTCAGAC
ATAAAGAGAG TAGAGTTTCA CGAGGTGACT AGGAGAGCTA TACTTAATGC GCTAGCCAAT
CCACGCGACA TCAACTACTC ACTTGTAAAA GCCCAGATAG TCCGGAGAGT TGAGGATAGA
TGGCTCGGCT TTGGGCTCAG CAAGATATTA CAGACGAAAT TTGGAAATCC AAACCTGTCG
GCAGGCAGAG TTCAATCTCC AGTCTTGGGC TGGATTGTAA AAACTTATGA AGAATCTCTA
AAAAACAGGG TCTATAACGT AGATCTACAG CTAGACGCCG CCTACTGCGT AGAGCCCTCT
TCCTGCGTCT TAAGACTTCA AATACCTGGT GATATACTAC AGACGTTAAA GAAAAAGAAG
AGAGTAGCTA TCAAAAAAGA GTCTGAAGAG GAGAGAGTTG TAAATCCGCT GCCACCATAT
ACGACAGATG AACTGCTGAG AGACGCTGTA AATAGGCTCG GACTTTCAGC TGACTATGCC
ATGAAGGTAG CACAAGATTT ATTTGAAAGC GGCCTCATCA CCTACCATCG CACAGATAGC
ACTAGGGTCT CTGCCGCTGG AATAGCTATC GCAAAAGAGT ATATTACAAA GAGGTTTGGA
GAGGGCGTAT TTAAGCCAAG AAGCTGGGGC GAGGCGACGG AAGGAGCTCA TGAGGCGATT
AGACCCACAA GACCGCTAGA CGTAGAAGAA CTAAGGGGGC TAGTCAACGC TGGAGTTATA
CAACTCGCCA TCCAATTAAG GAGAGAACAT TACCAACTCT ATGATTGGAT CTTTAGGAGA
TTTATGGCAA GTCAGATGGA GCCTAGTGTT GTAAAAGCTA TTAAGTACGT AATAGAGATA
GACGGGCACT CTCTAGAGCT AGAGAGAGTT GTAGAGACTA TCCGCCCGGG TTTCCAACAG
CTTTACCCAC TCACTCCCGT GGAGCCTGAG TTACCGACTG GGACAATAGA GGTAGCTATT
AAGAGATACC GAGTAGTGAG AAAAGTACTT TCGCAAGCTG ATATTCTAGC GCTGATGCGT
CAGAGAGGCA TTGGGAGACC TAGTACGTAT GCGCGGATAC TCCAAGTGCT TGCAAAAAGA
TATTATGTAT ATGTCGTCGG ACGTAGGAAA CTCATGGTGC CTACTAAGAG AGGTATTGAA
GTGTATCATT TCCTAGAGAA TAACTTTAGC AATTTAGTAT CTGAGGAGAG GACGCGGTTA
ATAGAACAAT ATATGGACGC GATAGAGGTG GGAAACGCAG AGTATGAAGG CGTATTGAAA
GAACTATTTG ATGAATTTAC AAGAGAGATA CTATCGCGAG CCCCCCTTAC GTGA
 
Protein sequence
MDVPHVVYLH SCPNCGGPIT SDRLAAGLPC YECLPKEPQA KAIGEVVEAL RRRKALKELA 
RVAEYLREYN KFSAFFKEII GYEMWGAQRL WARRLVRGKS FAIVAPTGSG KTTFILVATL
YMALRGKKTL LIFPTSALAH QAYKKLMSFA EKVGASVKTL AYHSLLTEKE KDEVLAAIER
GEFDVLIITS AFLPRRFDLL SRYKFEFIAA DDVDSILRAT SKNIDRILKL LGVSDEVLKT
ALDIISLTKQ IRKAEVVGDL KEVERLEQEL SSARAKLQEE VRKLKLGIFI ASGALAKARR
TTRLLLFREL LGFDVGGRAE GLRNVTDVYI DMSQDVVMQT IEILKRLGPG GIVYVQDREL
GIAIAEKAKE RGLSVEHFFK PRRGILESFE KGEIYALVGL ASPRSPLVRG IDLPHVIRYV
VFVGVPKYRF RVRLEEFSIP AYLTFLYNVR TVLTGELRYK ADRLIGQLKR LAPYAISVQE
ALRKASEGAE LTGFDRHVVD VVKSAVDFVN NLLMRDDLRQ AIESSTEVKL TRIDDEFYVL
VPDVTTYIQG SGRTSRLYAG GLSKGLSVVI VDDKKVFHAL KRELKLRFDE AEFKHIDEVD
LNAVLAEIDK DRKAIRDILE GRVTPATKGV ELLKTVLMIV ESPTKARTIA NFFGRPSLIV
TDGVPIYEVS TGDAVLMITA SLGHIYELPT SLKRIDSRQR EILAKWFGEF KYDSYNGEEY
AVIVKEGSFI PVYNKIWRCR NAVYIDDTDV PPDCKPLDVL SAIRNIAIEV DTVLIGTDPD
SEGEKIAFDL YLGLRPYVSD IKRVEFHEVT RRAILNALAN PRDINYSLVK AQIVRRVEDR
WLGFGLSKIL QTKFGNPNLS AGRVQSPVLG WIVKTYEESL KNRVYNVDLQ LDAAYCVEPS
SCVLRLQIPG DILQTLKKKK RVAIKKESEE ERVVNPLPPY TTDELLRDAV NRLGLSADYA
MKVAQDLFES GLITYHRTDS TRVSAAGIAI AKEYITKRFG EGVFKPRSWG EATEGAHEAI
RPTRPLDVEE LRGLVNAGVI QLAIQLRREH YQLYDWIFRR FMASQMEPSV VKAIKYVIEI
DGHSLELERV VETIRPGFQQ LYPLTPVEPE LPTGTIEVAI KRYRVVRKVL SQADILALMR
QRGIGRPSTY ARILQVLAKR YYVYVVGRRK LMVPTKRGIE VYHFLENNFS NLVSEERTRL
IEQYMDAIEV GNAEYEGVLK ELFDEFTREI LSRAPLT