Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1245 |
Symbol | |
ID | 4617817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1129330 |
End bp | 1133043 |
Gene Length | 3714 bp |
Protein Length | 1237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639784336 |
Product | reverse gyrase |
Protein accession | YP_930753 |
Protein GI | 119872746 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1110] Reverse gyrase |
TIGRFAM ID | [TIGR01054] reverse gyrase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000744005 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGTGC CACATGTGGT ATATCTTCAC AGCTGTCCTA ACTGCGGTGG GCCTATCACA TCTGATAGAC TTGCTGCCGG TCTTCCCTGT TATGAATGTC TTCCAAAAGA GCCTCAGGCA AAGGCTATAG GTGAAGTTGT AGAGGCTTTA CGTAGGAGAA AGGCGTTAAA GGAATTAGCA CGGGTTGCAG AGTATCTACG GGAGTACAAT AAGTTTTCGG CGTTTTTCAA GGAAATAATC GGCTACGAAA TGTGGGGTGC CCAGCGACTT TGGGCAAGGA GATTGGTCAG AGGAAAAAGT TTTGCAATAG TAGCGCCAAC TGGGTCTGGA AAAACCACCT TTATCCTAGT GGCAACTCTA TATATGGCGC TGAGGGGGAA AAAGACGTTG TTAATATTTC CCACATCTGC TTTAGCACAT CAGGCGTATA AAAAATTGAT GTCTTTTGCT GAAAAAGTCG GTGCGTCTGT TAAAACATTG GCGTATCATT CTCTACTCAC CGAGAAGGAA AAAGACGAGG TTCTAGCAGC AATTGAGAGG GGAGAATTTG ACGTTTTAAT TATAACATCG GCATTCCTCC CCCGCCGCTT TGACCTACTT AGTAGGTATA AATTCGAATT CATCGCTGCA GATGATGTCG ATAGTATACT CAGAGCGACT AGCAAAAACA TTGATAGAAT CTTAAAACTG CTAGGCGTGT CGGATGAGGT TTTAAAAACC GCACTAGACA TAATTAGTCT AACTAAACAA ATTAGAAAGG CTGAAGTCGT AGGCGATTTA AAAGAGGTGG AGCGTCTCGA ACAAGAGCTG TCCTCTGCCA GGGCGAAACT ACAGGAGGAG GTACGTAAGC TAAAACTTGG CATCTTTATA GCATCTGGAG CTTTAGCTAA AGCTAGGAGA ACTACACGCC TACTTTTATT TAGAGAGCTT CTTGGATTTG ATGTAGGCGG CAGAGCCGAA GGTCTTCGTA ATGTGACAGA CGTCTATATA GATATGTCAC AAGATGTAGT AATGCAGACA ATAGAAATTT TAAAGAGATT GGGCCCCGGC GGAATTGTTT ATGTACAAGA CAGAGAGTTG GGGATAGCCA TAGCGGAGAA AGCTAAAGAA CGGGGCCTTT CTGTAGAACA TTTCTTCAAG CCCCGCCGCG GCATATTAGA GAGTTTTGAA AAGGGGGAGA TCTACGCATT GGTGGGACTG GCGTCGCCAC GTTCCCCACT TGTGAGGGGG ATAGATTTAC CACATGTAAT TAGATACGTC GTCTTCGTCG GAGTGCCGAA GTATAGATTT AGAGTTAGAC TTGAGGAATT TTCAATACCA GCATACCTCA CCTTTTTATA CAACGTACGA ACTGTTTTGA CAGGCGAGCT AAGATATAAA GCCGACAGAT TAATAGGCCA GCTTAAACGT CTTGCCCCCT ATGCAATAAG TGTACAAGAG GCGCTTAGAA AGGCTTCTGA GGGCGCAGAG CTTACAGGCT TTGATAGACA TGTAGTAGAT GTTGTAAAAT CAGCCGTCGA TTTCGTAAAT AATCTACTTA TGAGAGACGA TTTGAGACAA GCTATAGAGA GCTCCACCGA GGTAAAGCTA ACGCGTATAG ACGACGAGTT CTACGTCCTT GTGCCAGATG TCACAACCTA TATCCAAGGC AGTGGGAGAA CTTCACGTCT TTACGCAGGC GGGCTTTCTA AAGGCCTTAG CGTTGTCATC GTAGACGACA AAAAAGTCTT CCACGCCCTA AAGAGGGAGT TAAAACTTAG GTTTGACGAG GCGGAGTTTA AACATATAGA TGAGGTCGAT CTAAACGCCG TACTTGCTGA AATAGATAAA GACAGAAAAG CCATCAGAGA TATCTTAGAG GGGAGAGTTA CCCCGGCAAC CAAAGGCGTT GAGCTACTAA AGACTGTGCT TATGATTGTA GAATCTCCCA CAAAGGCCAG GACAATAGCA AACTTCTTCG GTAGGCCAAG TCTGATAGTT ACAGATGGCG TTCCCATATA TGAGGTTTCA ACTGGTGACG CTGTCCTTAT GATTACTGCG TCGCTTGGCC ATATATATGA ACTACCTACC TCGCTCAAGA GAATAGACTC TAGACAACGC GAGATTTTAG CCAAGTGGTT TGGAGAGTTT AAATATGACA GTTACAATGG CGAGGAATAT GCGGTAATTG TAAAAGAGGG CAGCTTCATT CCAGTTTATA ACAAGATCTG GAGATGTCGC AATGCCGTAT ATATAGACGA CACAGATGTA CCCCCAGACT GCAAACCGCT TGATGTCTTG TCGGCAATTA GAAACATAGC TATAGAGGTA GATACAGTAC TCATCGGCAC AGATCCAGAC TCAGAAGGTG AAAAGATAGC ATTTGATTTA TACCTCGGGC TAAGGCCTTA CGTCTCAGAC ATAAAGAGAG TAGAGTTTCA CGAGGTGACT AGGAGAGCTA TACTTAATGC GCTAGCCAAT CCACGCGACA TCAACTACTC ACTTGTAAAA GCCCAGATAG TCCGGAGAGT TGAGGATAGA TGGCTCGGCT TTGGGCTCAG CAAGATATTA CAGACGAAAT TTGGAAATCC AAACCTGTCG GCAGGCAGAG TTCAATCTCC AGTCTTGGGC TGGATTGTAA AAACTTATGA AGAATCTCTA AAAAACAGGG TCTATAACGT AGATCTACAG CTAGACGCCG CCTACTGCGT AGAGCCCTCT TCCTGCGTCT TAAGACTTCA AATACCTGGT GATATACTAC AGACGTTAAA GAAAAAGAAG AGAGTAGCTA TCAAAAAAGA GTCTGAAGAG GAGAGAGTTG TAAATCCGCT GCCACCATAT ACGACAGATG AACTGCTGAG AGACGCTGTA AATAGGCTCG GACTTTCAGC TGACTATGCC ATGAAGGTAG CACAAGATTT ATTTGAAAGC GGCCTCATCA CCTACCATCG CACAGATAGC ACTAGGGTCT CTGCCGCTGG AATAGCTATC GCAAAAGAGT ATATTACAAA GAGGTTTGGA GAGGGCGTAT TTAAGCCAAG AAGCTGGGGC GAGGCGACGG AAGGAGCTCA TGAGGCGATT AGACCCACAA GACCGCTAGA CGTAGAAGAA CTAAGGGGGC TAGTCAACGC TGGAGTTATA CAACTCGCCA TCCAATTAAG GAGAGAACAT TACCAACTCT ATGATTGGAT CTTTAGGAGA TTTATGGCAA GTCAGATGGA GCCTAGTGTT GTAAAAGCTA TTAAGTACGT AATAGAGATA GACGGGCACT CTCTAGAGCT AGAGAGAGTT GTAGAGACTA TCCGCCCGGG TTTCCAACAG CTTTACCCAC TCACTCCCGT GGAGCCTGAG TTACCGACTG GGACAATAGA GGTAGCTATT AAGAGATACC GAGTAGTGAG AAAAGTACTT TCGCAAGCTG ATATTCTAGC GCTGATGCGT CAGAGAGGCA TTGGGAGACC TAGTACGTAT GCGCGGATAC TCCAAGTGCT TGCAAAAAGA TATTATGTAT ATGTCGTCGG ACGTAGGAAA CTCATGGTGC CTACTAAGAG AGGTATTGAA GTGTATCATT TCCTAGAGAA TAACTTTAGC AATTTAGTAT CTGAGGAGAG GACGCGGTTA ATAGAACAAT ATATGGACGC GATAGAGGTG GGAAACGCAG AGTATGAAGG CGTATTGAAA GAACTATTTG ATGAATTTAC AAGAGAGATA CTATCGCGAG CCCCCCTTAC GTGA
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Protein sequence | MDVPHVVYLH SCPNCGGPIT SDRLAAGLPC YECLPKEPQA KAIGEVVEAL RRRKALKELA RVAEYLREYN KFSAFFKEII GYEMWGAQRL WARRLVRGKS FAIVAPTGSG KTTFILVATL YMALRGKKTL LIFPTSALAH QAYKKLMSFA EKVGASVKTL AYHSLLTEKE KDEVLAAIER GEFDVLIITS AFLPRRFDLL SRYKFEFIAA DDVDSILRAT SKNIDRILKL LGVSDEVLKT ALDIISLTKQ IRKAEVVGDL KEVERLEQEL SSARAKLQEE VRKLKLGIFI ASGALAKARR TTRLLLFREL LGFDVGGRAE GLRNVTDVYI DMSQDVVMQT IEILKRLGPG GIVYVQDREL GIAIAEKAKE RGLSVEHFFK PRRGILESFE KGEIYALVGL ASPRSPLVRG IDLPHVIRYV VFVGVPKYRF RVRLEEFSIP AYLTFLYNVR TVLTGELRYK ADRLIGQLKR LAPYAISVQE ALRKASEGAE LTGFDRHVVD VVKSAVDFVN NLLMRDDLRQ AIESSTEVKL TRIDDEFYVL VPDVTTYIQG SGRTSRLYAG GLSKGLSVVI VDDKKVFHAL KRELKLRFDE AEFKHIDEVD LNAVLAEIDK DRKAIRDILE GRVTPATKGV ELLKTVLMIV ESPTKARTIA NFFGRPSLIV TDGVPIYEVS TGDAVLMITA SLGHIYELPT SLKRIDSRQR EILAKWFGEF KYDSYNGEEY AVIVKEGSFI PVYNKIWRCR NAVYIDDTDV PPDCKPLDVL SAIRNIAIEV DTVLIGTDPD SEGEKIAFDL YLGLRPYVSD IKRVEFHEVT RRAILNALAN PRDINYSLVK AQIVRRVEDR WLGFGLSKIL QTKFGNPNLS AGRVQSPVLG WIVKTYEESL KNRVYNVDLQ LDAAYCVEPS SCVLRLQIPG DILQTLKKKK RVAIKKESEE ERVVNPLPPY TTDELLRDAV NRLGLSADYA MKVAQDLFES GLITYHRTDS TRVSAAGIAI AKEYITKRFG EGVFKPRSWG EATEGAHEAI RPTRPLDVEE LRGLVNAGVI QLAIQLRREH YQLYDWIFRR FMASQMEPSV VKAIKYVIEI DGHSLELERV VETIRPGFQQ LYPLTPVEPE LPTGTIEVAI KRYRVVRKVL SQADILALMR QRGIGRPSTY ARILQVLAKR YYVYVVGRRK LMVPTKRGIE VYHFLENNFS NLVSEERTRL IEQYMDAIEV GNAEYEGVLK ELFDEFTREI LSRAPLT
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