Gene Pisl_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1243 
Symbol 
ID4616944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1128093 
End bp1128629 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID639784334 
Producthypothetical protein 
Protein accessionYP_930751 
Protein GI119872744 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.188062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA CCATAGGCGC TGTGTCTGTA ATAATAACCA AGGGAGATAT AACTGAGGTT 
GAGGCAGATG CTATAGTTAA TGCTGCGAAT TCCTATCTTG AACACGGAGG GGGCGTTGCC
GGCGCAATTG TAAGAAAAGG CGGCCAGATA ATACAGGAGG AGAGTAGAGA GTGGGTTAGG
AGATACGGCC CAGTGCCAGT CGGCGGCGTG GCTGTAACAT CTGCAGGTCG TCTAAAGGCC
AAATATGTAA TTCACGCAGT GGGACCGCGT TGCAGCGTTG AGCCCATTGA GAAATTAGGC
GAGGCTGTAA GGAATGCGCT TCTTAAGGCA GACGAGCTTG GGTTAAGCTC CATAGCGTTT
CCAGCCATAA GCACGGGGAT TTTTGGATGC CCATATGAAG ATGCCGCATA TCAAATGGCC
AAGACTATTA GAGACATAGC GCCCTCTTTA AAATACGTTA GAAAGATCTT AGTTGTTCTC
TACGGAGACG AGGCCTATAG GAAATTTGAA GAGGTTTTTA AAAAAGTCTT AAGTTGA
 
Protein sequence
MDFTIGAVSV IITKGDITEV EADAIVNAAN SYLEHGGGVA GAIVRKGGQI IQEESREWVR 
RYGPVPVGGV AVTSAGRLKA KYVIHAVGPR CSVEPIEKLG EAVRNALLKA DELGLSSIAF
PAISTGIFGC PYEDAAYQMA KTIRDIAPSL KYVRKILVVL YGDEAYRKFE EVFKKVLS