Gene Pisl_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1242 
Symbol 
ID4618012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1126487 
End bp1127371 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID639784332 
ProductFis family transcriptional regulator 
Protein accessionYP_930750 
Protein GI119872743 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.635409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAAG TCTACCGGAC ACTGAGGGTT GAAATCCCCT GGCAGTTGGT AGAAGAGAGG 
CCAGACGTCC TAGACCCCGC CGTAAGGATG GAAGAGGGCG CCGAGTTGAA ACTAGCGTTC
CTCGGCGTTG AGAAGAGAGG TGGTAAGAAG GAGCCGACAT TTGGTGGCCT ATACGTCGCG
TTGGTGTTCG CTAGAGAGGT GACGCCGGTG GAGCCCAGGG CTATTGTCGT TGTTGACGTC
AACCGGTTGG ACCACTACAT AAAAGTTGGT CTCGTGGTCG ACGGTCGTGT CGTGGAGCTA
TTGAAGTTCC CCAAGAGGGG GCGGGTTCAG AAACTGGAGA GGATCCACGT CCACATAAGA
CAGCTGAGTA GAGCTTTGGC TAAGGTAGAC GAGGACAGAG ACCCGCGTAG AGCGTTAGAC
CTCCAGAGAC AGCTGTGGAA GCTTAAGACG AAGCGCTATG GCATAATCCG AGACATCGTT
ATAAACGCTA CGCGTGAGAT TATAAAGCTG GCCAGAGAGC ACCAAGCCGC GATCGCGTTG
GACACGATGG AAGACGACAC CTACCGGGAG CTGAAGGAGA GGAACGGAGA CGGAGTGAAG
AAGCACCTCC TAGACGGTTT GGGACAACTA AGGAAGCGCC TACAGGCGCT CGCGCAGTGG
TACGGACTGC CGTATTTGGA GGAGCGACTG TATTCGACCA TCTGCCCCAA ATGCAACGCT
AAGATGGTTG AGGAAAACGG CCGCTTCATG CGCTGTCCCG CCTGCGGCTT CAAGGCACAT
AGAGACAACG TGCCGGTGAT ATGGGCAGAA AAACGCTACT GGGAAATCCT CCAGAAAACA
AAACAACCCA CTTTTTCGGC GGCCGTCACA TTTTTAACCT CGTAA
 
Protein sequence
MGQVYRTLRV EIPWQLVEER PDVLDPAVRM EEGAELKLAF LGVEKRGGKK EPTFGGLYVA 
LVFAREVTPV EPRAIVVVDV NRLDHYIKVG LVVDGRVVEL LKFPKRGRVQ KLERIHVHIR
QLSRALAKVD EDRDPRRALD LQRQLWKLKT KRYGIIRDIV INATREIIKL AREHQAAIAL
DTMEDDTYRE LKERNGDGVK KHLLDGLGQL RKRLQALAQW YGLPYLEERL YSTICPKCNA
KMVEENGRFM RCPACGFKAH RDNVPVIWAE KRYWEILQKT KQPTFSAAVT FLTS