Gene Pisl_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1237 
Symbol 
ID4617083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1121480 
End bp1122721 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content47% 
IMG OID639784327 
Productmajor facilitator transporter 
Protein accessionYP_930745 
Protein GI119872738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTAGAG ATTGCGCCAT GAAACTTACA GTCTCTTATG TACCTATTTT CGTTGCGCGT 
ATAGGTTCAG GGGCAAGCGC CTTTTTAGTT GTTAAACTTG CAAGTGGCGG CCATCTAGAG
GCCGGTGTTG TTTTGGCTGC CTACCCGTTT CTAGAAGCGT TAGGTGCATT AATAGCCGGC
CGTTGGTCAG ATACCCTTGG CCGTAAGAAG ACGCTGGTGG TCGGCTATGT GGTGAGGTCG
TTGGCCATGC TTATGTTGGC TTGGGCTTTT TTTACACATA CATCTCCTGT CTTGGAGGCG
TTTTTAAACG GCGTGATTGG GCTTACGACG GCGTTTATAC TCACAGCATC GCTTACAATG
GCTACGGACT TAACTGAGGT TAAAAATAGG GGGGTGGGCA TGGGCGGTTT TGAATTTATA
AATCTTGCTA GCTATGGCGT TGGGTATCTA ATTGGTTCGG CGTTATATAC ATTATTTAAA
GGGCCGGCGG CTTATTTGAC AATAGCGATA GTCACAGCGT TGGCAACACC TATTTTTGCA
AAATTTCTCA TAGAAACTAG GCCGGTCGCG CCGGTCGGCG GTAAATTTTT GTTGTCAGTT
CTACCGCCCT CTGCTGTAGT TCTGTTGCCG GTTTGGTTTG CCCTTACTAC AATTATAGGT
CTCGGGATGT TTGCCCCGAG AGTTCTTCAA GTGAGCCGTG AAACAAGTAG CATAGCTGAA
AGCATAGTGG GAAGACTTGG CGAGAGTCTT ATAGTTGGTG TTTTATTTAT TGGGGCATTG
TCTCTCCTAG GCGTAGGCGC TATTTTCTTT GGCAGACTCG CGGATAGATG GGGGCGCGTG
AAGACATTTA GACTCGGCCT TGTTGGCGGT CTTGCGGCTC TCTTAGTCTT AAACATTGCG
CTTCACCTTG GGCTGGGGCC TCTTGAGTCT ATAGCTTTAA CAGCGCCCCT ACTCTTTTTA
ACATCTGCGA TAGGGCCTAG TATTTTGGCG TTGATAGGAG ACGAGGCTGA TATTAGATAC
AGGGGAACCA CCATGGGGAT ATACAGTGTA GTACTAGGCC TTGGCATAGG CATAGGTAGT
CTCCTCGGCG GTGCTATATC CTCTATAAGC CGTCAATACG CGATTAACGG CCTTGCGACA
GCCGCGTTAG GAGTTTATGT CGTTATGACA ACAATACATA TATTATTGGC AAAGACATAT
AAAACCTATG TAAAAGACAC TATATTTGTA GCGACGCGAT AA
 
Protein sequence
MCRDCAMKLT VSYVPIFVAR IGSGASAFLV VKLASGGHLE AGVVLAAYPF LEALGALIAG 
RWSDTLGRKK TLVVGYVVRS LAMLMLAWAF FTHTSPVLEA FLNGVIGLTT AFILTASLTM
ATDLTEVKNR GVGMGGFEFI NLASYGVGYL IGSALYTLFK GPAAYLTIAI VTALATPIFA
KFLIETRPVA PVGGKFLLSV LPPSAVVLLP VWFALTTIIG LGMFAPRVLQ VSRETSSIAE
SIVGRLGESL IVGVLFIGAL SLLGVGAIFF GRLADRWGRV KTFRLGLVGG LAALLVLNIA
LHLGLGPLES IALTAPLLFL TSAIGPSILA LIGDEADIRY RGTTMGIYSV VLGLGIGIGS
LLGGAISSIS RQYAINGLAT AALGVYVVMT TIHILLAKTY KTYVKDTIFV ATR