Gene Pisl_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1210 
Symbol 
ID4616347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1097164 
End bp1097691 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content42% 
IMG OID639784302 
ProductZPR1-like zinc finger protein 
Protein accessionYP_930720 
Protein GI119872713 
COG category[R] General function prediction only 
COG ID[COG1779] C4-type Zn-finger protein 
TIGRFAM ID[TIGR00310] ZPR1 zinc finger domain
[TIGR00340] ZPR1-related zinc finger protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.4233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAA TATATAGCGG CGAAATAACT TGTCCAGTCT GTGGAACAAA GACATTTAGA 
TATGTGGAGA TACTATATGA GACTCCCTTT TTCGGCAACG TGTTACTTCA AAGCGGCTAC
TGTAGCAATT GCGGCTACCG CCTTTTTGAC GTCGAATATG CAGAAGTTGG ACGGCCAATT
CGCGTAATTT TTAAAGCCAA AGACGGCATA GATGTTGCAA AATCTCTTCT CATCCGTAGC
AAGACTGGAG TCATATATTC GCCAGATTTA GGCTTTTCAC TAGAGCCGGG GAGCCACGGA
GAGCCTATGA TAACTACAGT AGAGGGCTTT ATGTATAAGA TAATTGACTA TGCGGAAAGA
CTAAAAGCCC TAGAGCCTGA AAATGCCGCT AAAATAGACG GATTTATAAA TACCGTATAT
GAGAAGATAG AGAAAGGCGG TTTTACCCTA ATAGTTGAGG ACTCGCTAGG GAAGTCGTTT
ATACAGCCGT ATAGGCCAGA AACAGTAACA GTAGAATACC TAGAGTAG
 
Protein sequence
MSIIYSGEIT CPVCGTKTFR YVEILYETPF FGNVLLQSGY CSNCGYRLFD VEYAEVGRPI 
RVIFKAKDGI DVAKSLLIRS KTGVIYSPDL GFSLEPGSHG EPMITTVEGF MYKIIDYAER
LKALEPENAA KIDGFINTVY EKIEKGGFTL IVEDSLGKSF IQPYRPETVT VEYLE