Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1205 |
Symbol | |
ID | 4617049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1093759 |
End bp | 1094496 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639784297 |
Product | hypothetical protein |
Protein accession | YP_930715 |
Protein GI | 119872708 |
COG category | [S] Function unknown |
COG ID | [COG1836] Predicted membrane protein |
TIGRFAM ID | [TIGR00297] conserved hypothetical protein TIGR00297 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCT ACATTATTAC AGTGCCCTCT GTTGTAATTT TGGCTATTCT GGCATTAAAG AAAGGCTTTC TCACTACAAG AGGCACGCTC TCTGCAATAG CCGTGGGAGT AGCCGTCGCA ATAGCTCATA TGGGCCTCTT TCTACTGATG GCGGTATTCT TTGTTACATC TTCGCTCCTT ACAAAACTCA GGGCCCAGTG GAAGTTGGAA AGGGGTCTCA AAGACGTCTC TGGCCGCTCG CTGAGACAGG TAGTGGGCGT CGGCACGCCA ATTGCTATGT TTGCATCTAT CTATCTTTTG ACAGGCGACG CTAAGTTTTT GGGCGCGGCG GCTGTGGCAG TGGCCATTGC TACTGCAGAT ACATGGGCAA GCGAGGTCGG CGTGGCATAT GGCGGAACGC CGAGGTATAT TCTTGCACCG TGGAGACGGG TAGAACCTGG GACTTCTGGC GGCATAACGC TTATAGGCAC TATGGCGTCT GTGGCAGGAG CTTTTACTAT AGCGGCTCTA TCACCCCTCC TTTGGATACC ACAGCCGTTT TGGAAAATCG CTCTTTTTGG ATATTTAGGC GAGCTCTTAG ACAGTATATT AGGCGCAGCT CTCCAGATAA AGTATGTTTG TAATGGCAAA ATATTGGAAA CTTATGTAAC TGGCTGTCGT AAGAAAGGCT TTTTAACAAA TGAGAGCGTC AATTTAGTGA GCGGCGTGAT GGTTGGCTTT CTCTACGTCA TAACTTAA
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Protein sequence | MDLYIITVPS VVILAILALK KGFLTTRGTL SAIAVGVAVA IAHMGLFLLM AVFFVTSSLL TKLRAQWKLE RGLKDVSGRS LRQVVGVGTP IAMFASIYLL TGDAKFLGAA AVAVAIATAD TWASEVGVAY GGTPRYILAP WRRVEPGTSG GITLIGTMAS VAGAFTIAAL SPLLWIPQPF WKIALFGYLG ELLDSILGAA LQIKYVCNGK ILETYVTGCR KKGFLTNESV NLVSGVMVGF LYVIT
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