Gene Pisl_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1205 
Symbol 
ID4617049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1093759 
End bp1094496 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID639784297 
Producthypothetical protein 
Protein accessionYP_930715 
Protein GI119872708 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT ACATTATTAC AGTGCCCTCT GTTGTAATTT TGGCTATTCT GGCATTAAAG 
AAAGGCTTTC TCACTACAAG AGGCACGCTC TCTGCAATAG CCGTGGGAGT AGCCGTCGCA
ATAGCTCATA TGGGCCTCTT TCTACTGATG GCGGTATTCT TTGTTACATC TTCGCTCCTT
ACAAAACTCA GGGCCCAGTG GAAGTTGGAA AGGGGTCTCA AAGACGTCTC TGGCCGCTCG
CTGAGACAGG TAGTGGGCGT CGGCACGCCA ATTGCTATGT TTGCATCTAT CTATCTTTTG
ACAGGCGACG CTAAGTTTTT GGGCGCGGCG GCTGTGGCAG TGGCCATTGC TACTGCAGAT
ACATGGGCAA GCGAGGTCGG CGTGGCATAT GGCGGAACGC CGAGGTATAT TCTTGCACCG
TGGAGACGGG TAGAACCTGG GACTTCTGGC GGCATAACGC TTATAGGCAC TATGGCGTCT
GTGGCAGGAG CTTTTACTAT AGCGGCTCTA TCACCCCTCC TTTGGATACC ACAGCCGTTT
TGGAAAATCG CTCTTTTTGG ATATTTAGGC GAGCTCTTAG ACAGTATATT AGGCGCAGCT
CTCCAGATAA AGTATGTTTG TAATGGCAAA ATATTGGAAA CTTATGTAAC TGGCTGTCGT
AAGAAAGGCT TTTTAACAAA TGAGAGCGTC AATTTAGTGA GCGGCGTGAT GGTTGGCTTT
CTCTACGTCA TAACTTAA
 
Protein sequence
MDLYIITVPS VVILAILALK KGFLTTRGTL SAIAVGVAVA IAHMGLFLLM AVFFVTSSLL 
TKLRAQWKLE RGLKDVSGRS LRQVVGVGTP IAMFASIYLL TGDAKFLGAA AVAVAIATAD
TWASEVGVAY GGTPRYILAP WRRVEPGTSG GITLIGTMAS VAGAFTIAAL SPLLWIPQPF
WKIALFGYLG ELLDSILGAA LQIKYVCNGK ILETYVTGCR KKGFLTNESV NLVSGVMVGF
LYVIT