Gene Pisl_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1197 
Symbol 
ID4616875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1087844 
End bp1089055 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content46% 
IMG OID639784289 
Productadenylosuccinate lyase 
Protein accessionYP_930707 
Protein GI119872700 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCGC CTTTTGACTG GCGCTACGGT AGTGAAGAAA TCAGGGCTTT ATTTACGCCA 
CAATCTTTTA TCGATACATA CATAGAAGTG GAGAGGGCCC TTGTCTGCGT TTTGGAAGAG
TTAGGCGTCG CTGAGAGAGG CTGTTGTAAA TCGCTAGACG GCGTAAAAAT AAGCGCTGAG
GAGGTCTATA AACTAGAGAG AGAGACGGGA CACGATATTT TAAGCCTTGT CTTTCTCTTG
GAGCAGAAGA GTGGTTGCCG GTTTGTGCAC TACGGTGCTA CATCAAATGA TATAATAGAC
ACGGCATGGG CGTTGTTAAT ACGTCGCGCT CTTTCTATAG TAAAAAGGAA GCTAGATATA
GCAGGTGAAG AGTTGAAACG CCTTGCTAGG AGGTATAAAA AACTTGTGAT GGTGGGGCGG
ACTCATGGCC AGTGGGCAGA GCCAATAACT CTAGGTTTTA AATTCGCTAA TTACTATTAT
GAGCTGTATA TGGCCTGTAG ATTTTTAACA CAAGCTGAGG ATTTCATAAG GGCTAAGATT
GGGGGCGCTG TGGGAACTAT GGCCGCTTGG GGAGAGCTGG GGCTTGAGAT AAGGCGCCGG
GTTGCAGAGA GGTTAGGCTT GCCCTACCAC ATAATTACGA CTCAAGTAGC GCCGAGGGAG
AGCTTTGCGG CTTTGGCTTC TGCGCTAGCG GTGTTAGCTA CTGTTTTTGA GCGTCTAGCT
ACTGAAATAC GTGAATTATC TAGACCTGAG ATAGGCGAAG TAATAGAGAG AGGCGGAGGC
TCGTCGGCAA TGCCACATAA GACAAATCCT ACAGTCTCAG AGAGAGTAGT GAGTCTTGCT
AGATATGTTA GATCGCTTAT AGACGTTGCG TTAGAAAACG TAGCTCTGTG GCATGAACGC
GATCTTACCA ATTCGGCAAA TGAGAGAGTG TGGATACCAG AGGTTTTTCT AGCTATTGAC
GAAATTTTAA ACAGCGTAGC CAAGGTTCTG CGTAATATAG AGATAAACGA GGCTAGAATC
GAGGAGAACT TACAGAAGGC CTTGCCGTAT ATACTCACAG AGTTTCATAT GAATAGACTG
GTTAGAGAAG GTTTTTCTAG AGCCGAGGCC TATCGTAGGG CTAGAGAAAT AAAAGAAGTA
ACTTTCGAAT ACGAGAGGTG GCCGATTGAA AAACTTATCG AGGACGCCCT TTCATTGAAG
TTATGCGGGT AG
 
Protein sequence
MISPFDWRYG SEEIRALFTP QSFIDTYIEV ERALVCVLEE LGVAERGCCK SLDGVKISAE 
EVYKLERETG HDILSLVFLL EQKSGCRFVH YGATSNDIID TAWALLIRRA LSIVKRKLDI
AGEELKRLAR RYKKLVMVGR THGQWAEPIT LGFKFANYYY ELYMACRFLT QAEDFIRAKI
GGAVGTMAAW GELGLEIRRR VAERLGLPYH IITTQVAPRE SFAALASALA VLATVFERLA
TEIRELSRPE IGEVIERGGG SSAMPHKTNP TVSERVVSLA RYVRSLIDVA LENVALWHER
DLTNSANERV WIPEVFLAID EILNSVAKVL RNIEINEARI EENLQKALPY ILTEFHMNRL
VREGFSRAEA YRRAREIKEV TFEYERWPIE KLIEDALSLK LCG