Gene Pisl_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1196 
Symbol 
ID4616825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1086843 
End bp1087847 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID639784288 
Productadenylosuccinate synthetase 
Protein accessionYP_930706 
Protein GI119872699 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTATG TAGTAGTAGA TGGGTTCTTT GGCGATACTG GAAAGGGCAA GGTAGTAGCT 
TATTTAGCTC AAGCAGATAG CCCAGCACTG TGTGTAAGAA CCGGCGCGCC AAATGCTGGA
CATACTGTAG TTCTAGGGGG TCAGACTGTC GTGTTGAGGT CTCTTCCAAC CTGTTTTGTA
AACCAACAGA CAAAGTTAGC TGTGGCGCCA GGCGCGCTCA TAAAATTAGA TGTATTTCTT
CTTGAGGTTG AAAAATTCGG CGGTGGGAGG ACATATGTCG ATTATCAAAC AGGGGTGATA
GAAGATAAAC ATGTCGAGAT GGAGAGACAA GACGAGTACC TCATGAAGGT TGTGGGCTCT
ACTGGGCAAG GCGTGGGCGC GGCGATGGTT GATAGAGTAT TGAGAAGGCT GAAACTTGCG
AGAGACTTCG AAATTCTTAA GCCCTTTTTG GCAGACGTAC CAACTATGAT ATATGAAAAC
AGAGGTAATG GTGTGATTAT TGAGGGTACT CAGGGAACTT TTCTATCTCT ATATCACGGC
ACATATCCGT ATGTCACAAG TAGAGATGTT ACGGCAAGCG GAGTTTTAAG TGAGGCGGGC
GTTGGGCCGA AGGCTGTAGA CGAGGTCATA TTGGTCTTTA AGGCATATGT CACTAGAGTA
GGCGCAGGGC CTTTGCCAGG CGAGTTGCCG CCGGATGAAA TAGAGAGGAG GGGCTGGGCA
GAGAGGGGGG CTGTGACAGG TAGGCCGAGG AGAGCAGCTC CGTTTAATAT AGAATTGGCA
AAGAGAGCTG TGCTTCTCAA TACGCCAACG CAAATAGCCA TTACGAAGGT AGATGTGTTA
TTTAAAGATG CGACAAGCAA GACACGTTGG AGTGACTTGC CGCCGGAGGC GCGTAAGTGG
GTTGATGAGC TAGAAGAGAC GCTGAAAGTG CCAGTGACGC TTATAGGGAC GGGACCCGAG
CCGCGTCACA TGGTTGATTT AAGGAGAGAG AAGGGGAGGT TGTGA
 
Protein sequence
MLYVVVDGFF GDTGKGKVVA YLAQADSPAL CVRTGAPNAG HTVVLGGQTV VLRSLPTCFV 
NQQTKLAVAP GALIKLDVFL LEVEKFGGGR TYVDYQTGVI EDKHVEMERQ DEYLMKVVGS
TGQGVGAAMV DRVLRRLKLA RDFEILKPFL ADVPTMIYEN RGNGVIIEGT QGTFLSLYHG
TYPYVTSRDV TASGVLSEAG VGPKAVDEVI LVFKAYVTRV GAGPLPGELP PDEIERRGWA
ERGAVTGRPR RAAPFNIELA KRAVLLNTPT QIAITKVDVL FKDATSKTRW SDLPPEARKW
VDELEETLKV PVTLIGTGPE PRHMVDLRRE KGRL