Gene Pisl_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1195 
Symbol 
ID4617711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1085286 
End bp1086725 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content49% 
IMG OID639784287 
ProductFAD dependent oxidoreductase 
Protein accessionYP_930705 
Protein GI119872698 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACCC AGTATCTCTC CCGTCTACGA ACTCTTGAGA AATACGTCGG AGACTACGAC 
GTTGTAATAG TAGGAGCAGG ACCCGCCGGG TTATTCGCCG CGCTTGAGCT CGCAAAGGCA
GGCGGAGTGA GAGTTGCATT AATAGACGGG GGGTATAGAG CATCACAGAG ACGTTGTCCC
CTCCAAACGC CCCTAGAGAA GTGTACTTTC TGCGTGCCTT GTCATATTGT CTACGGAATT
GGGGGAGCCG GCACTTTGAG CTCCGGTCTC ATAAATCTCA GACCAGACGT GGGAGGAGAT
CTTCACGAAC TGGTTGGCGA TTGGGACAAG GCAATGGAAT TGATAAATTA CATAGACAAG
ACCTTCGTAG AGTTTGGAGC GCCTGGAGCA GTCTACGAGC CACAAATGGA ACTCATACAA
AGGCTCTCTG CACTAGCGGC TAGAGTTAAC GCCAGGATAA TACCCATACG CCAGAGACAT
ATTGGAACAG ATGGGTCAAG AGCTGTCGTA GAGAATATAA CCCAATACCT TGAAAAAGCA
GGTGTGGCTA TAATGTATGC CACATGGGCT CTTGAAGTTG AGAAAGGAGA CAATGGGTTA
TTTACAGTAA AAACAACAAG AGGAGTTCTA AATGCCAGAG CCGTTCTTTT AGCGCCAGGC
CGCGGCGGCG CCGAGTGGCT TATTTCTCAA CTAAAGAAAC TAGGCGCCTC GTTTAGCTTC
GGCCCTATAG ATATTGGAGT TAGAGTAGAA GTGCCTTACC ACGTCATGAA GCCTCTTACA
GACGCAATAC GCGACCCTAA GATAATTCTC TACACTTCTA AATACGACGA CAAGGTTAGA
ACATTTTGTA CAAACCCCCG TGGTTTTGTA GTAAAAGAAG TATATGCAGA CGGGACTGTT
GGAGTAAATG GAGAGACCTA TCTAGAGAGG AAAAGCGAAA ATACAAACTT CGCCTTCTTA
GTTACGCTCA GGCTTACAGA CCCGATGGAA GATACTATAG AATATGGTAA ATCTATAGCC
AAGCTAGCCA CTAAGCTGGG GGGCGGCAAG CCTCTTATAC AACGTCTCTA CGATTTAGAA
CGTGGACAGA GGTCTACCTG GGATAGAATC AGAAGATCTA GCATATCGCC GACTTTAAAA
GATGTAACTC CCGGCGATAT ATCTCTGGCG TTGCCCCATA GAGTTGTAGA GGACATAATA
GAGGGGCTTA AGAAACTTGA CGAACTTGCG CCTGGCGTGG CAAGCCCCCA GACGCTTATC
TACGCCCCTG AGATTAAATA CTATTCGCTA CGGCCTGTGG TAGATAAAAA CCTCATGACG
ACAGTGCCCG GGCTTTTTGT AGCGGGAGAC GGAGCTGGCC TTTCCAGAGG AATAAACGTA
GCGGCCGCCA CCGGCGTGTT GGCGGCAAGA GGGATTCTAA ATTACCTAGG CCGAGCCTAA
 
Protein sequence
MVTQYLSRLR TLEKYVGDYD VVIVGAGPAG LFAALELAKA GGVRVALIDG GYRASQRRCP 
LQTPLEKCTF CVPCHIVYGI GGAGTLSSGL INLRPDVGGD LHELVGDWDK AMELINYIDK
TFVEFGAPGA VYEPQMELIQ RLSALAARVN ARIIPIRQRH IGTDGSRAVV ENITQYLEKA
GVAIMYATWA LEVEKGDNGL FTVKTTRGVL NARAVLLAPG RGGAEWLISQ LKKLGASFSF
GPIDIGVRVE VPYHVMKPLT DAIRDPKIIL YTSKYDDKVR TFCTNPRGFV VKEVYADGTV
GVNGETYLER KSENTNFAFL VTLRLTDPME DTIEYGKSIA KLATKLGGGK PLIQRLYDLE
RGQRSTWDRI RRSSISPTLK DVTPGDISLA LPHRVVEDII EGLKKLDELA PGVASPQTLI
YAPEIKYYSL RPVVDKNLMT TVPGLFVAGD GAGLSRGINV AAATGVLAAR GILNYLGRA