Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1187 |
Symbol | |
ID | 4616830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1079545 |
End bp | 1080183 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639784280 |
Product | hypothetical protein |
Protein accession | YP_930698 |
Protein GI | 119872691 |
COG category | [S] Function unknown |
COG ID | [COG1628] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT GGACTTCGTT AGTGCAGCCA AGGAGAGATA CCCGCGTACT TCTCCCACGT CTTTTACAGA AGAACTTCAA GGTTGTAGCT ATAGCGGAGA GCTTTAGTCT TGAAGACGGT TACTCAATAT ACGCGGGAGT TCTAGCGCGT AGAGATGGCG TAGTAGAAGA AGTGGCGTTT GACATAGCAA CTCTAGGAGG CACAGACGGC ACAGAGTCTG TCTCTAGGAT TCTAAAGGCT GTGCTTAGGC CCGACGTCGG CTTAGTCATG TTAGACGGCT GTGTAGTCTC TTTCTACAAC TGGATAGACG GTGAGGAGCT GTGGAAGAGA TTTAGAAAGC CTGTAGCTTG TTACGTCTTC GAAGAACCCG AGGGGAGGGT GGAGGAGGCT GTGAGAAAGC TTTTTACAGA CTGGGAGAAG AGAGTGGAGG CATACAGAAG ATTAGGCCCG CCGGTGCCTT ATTATATGCG AAGCGGCTAT AAGATATATG TGAGGGCTTG GGGGATAGAC CCAATAGATG CCGGAAGGGC GGCCGAGCTG TGTACAAAAT TCGGCAAGAT GCCAGAACCG CTCCGCATAG CTAAGATAGT AGCTAGCGGG GCTAGACAAT TCTTAAAAAC CATCCGTATG AAGATATGA
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Protein sequence | MSHWTSLVQP RRDTRVLLPR LLQKNFKVVA IAESFSLEDG YSIYAGVLAR RDGVVEEVAF DIATLGGTDG TESVSRILKA VLRPDVGLVM LDGCVVSFYN WIDGEELWKR FRKPVACYVF EEPEGRVEEA VRKLFTDWEK RVEAYRRLGP PVPYYMRSGY KIYVRAWGID PIDAGRAAEL CTKFGKMPEP LRIAKIVASG ARQFLKTIRM KI
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