Gene Pisl_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1187 
Symbol 
ID4616830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1079545 
End bp1080183 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID639784280 
Producthypothetical protein 
Protein accessionYP_930698 
Protein GI119872691 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATT GGACTTCGTT AGTGCAGCCA AGGAGAGATA CCCGCGTACT TCTCCCACGT 
CTTTTACAGA AGAACTTCAA GGTTGTAGCT ATAGCGGAGA GCTTTAGTCT TGAAGACGGT
TACTCAATAT ACGCGGGAGT TCTAGCGCGT AGAGATGGCG TAGTAGAAGA AGTGGCGTTT
GACATAGCAA CTCTAGGAGG CACAGACGGC ACAGAGTCTG TCTCTAGGAT TCTAAAGGCT
GTGCTTAGGC CCGACGTCGG CTTAGTCATG TTAGACGGCT GTGTAGTCTC TTTCTACAAC
TGGATAGACG GTGAGGAGCT GTGGAAGAGA TTTAGAAAGC CTGTAGCTTG TTACGTCTTC
GAAGAACCCG AGGGGAGGGT GGAGGAGGCT GTGAGAAAGC TTTTTACAGA CTGGGAGAAG
AGAGTGGAGG CATACAGAAG ATTAGGCCCG CCGGTGCCTT ATTATATGCG AAGCGGCTAT
AAGATATATG TGAGGGCTTG GGGGATAGAC CCAATAGATG CCGGAAGGGC GGCCGAGCTG
TGTACAAAAT TCGGCAAGAT GCCAGAACCG CTCCGCATAG CTAAGATAGT AGCTAGCGGG
GCTAGACAAT TCTTAAAAAC CATCCGTATG AAGATATGA
 
Protein sequence
MSHWTSLVQP RRDTRVLLPR LLQKNFKVVA IAESFSLEDG YSIYAGVLAR RDGVVEEVAF 
DIATLGGTDG TESVSRILKA VLRPDVGLVM LDGCVVSFYN WIDGEELWKR FRKPVACYVF
EEPEGRVEEA VRKLFTDWEK RVEAYRRLGP PVPYYMRSGY KIYVRAWGID PIDAGRAAEL
CTKFGKMPEP LRIAKIVASG ARQFLKTIRM KI