Gene Pisl_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1176 
Symbol 
ID4617774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1067787 
End bp1068701 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content54% 
IMG OID639784269 
Producthypothetical protein 
Protein accessionYP_930687 
Protein GI119872680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGCA TGCACATGAA CCAAGCATAC AGAGTACTAA AGATCAAAAT CCCCTGGAAA 
CTAGTGGAGG AACGCCCCGA CGTCCTTGAC CTAGTGACGA GGATGCGCCT AGCGGCGGAG
GAGTACGTCA GAAGGCTGTT GAAGGAGTTG ACGGGAAAGG GAGAGCCCAG ACTCGCGCCG
GAGGAGCTTG ACCGTCTCCT CACGCCAGAC AGGCGGGAGC TGGCGCACCG GATTATCGAG
GAGGTGTTTC CCAAGTACGG GTTGGGGAGG TACTTCGTAA AGCAAGCCAG GGTGTTTTGG
CGTGATATTG CGTTCTACAG GGCGGTTCCG CTCAACGCCC AACTTAGAGT TGAGAACGAG
AGAGACGTGG GCAGGGCGGT TTTCGTCGAC CTAAAGAGCG GCGTAGTCAG AGTGCGTAAG
CTCGGCATAC CGCCTTTTGT CATTAAGTTG AAAAAGGGCG ACATCTCTTG GATCAGAAAA
CGGTTAAAAG AGGATGCTAA GTTGAAGTTG GCGTTCTTGA ACATAGAAAA GCGGAAGGGC
AAGAAGGAAC CGACCTACGG AAAGCTATAT GTTGTTCTCA TCTTCGCTAG GGAGGTAACG
CCAGTGGAGC CCAGGGCCGT TGTTGTCGTT GACGTGAACC GTCTCGACAA CGGCGTCACG
GCGGGTCTCC TCGTGGACGG AAAACTGAGA CAGACGTTGA GACTTCCCGA CGAGAGCGCG
GTAAGAGAAC TGAGGAGACT CCACGAGGAG ATAAGCCGTC TTGACGGAAA AGCCGCTAGG
GAGGCGGATC CCGTCAGAAG GAGACGTCTC GAAGACAGAG CACGTTATCT CGCGTCTAAG
CGGTTTAGGA AGATAAGGGG CATTGTGGCG CATATCGCTA GAGAAATAAT CGAGCGGAAC
AAAAGAGAAG ACTAA
 
Protein sequence
MPSMHMNQAY RVLKIKIPWK LVEERPDVLD LVTRMRLAAE EYVRRLLKEL TGKGEPRLAP 
EELDRLLTPD RRELAHRIIE EVFPKYGLGR YFVKQARVFW RDIAFYRAVP LNAQLRVENE
RDVGRAVFVD LKSGVVRVRK LGIPPFVIKL KKGDISWIRK RLKEDAKLKL AFLNIEKRKG
KKEPTYGKLY VVLIFAREVT PVEPRAVVVV DVNRLDNGVT AGLLVDGKLR QTLRLPDESA
VRELRRLHEE ISRLDGKAAR EADPVRRRRL EDRARYLASK RFRKIRGIVA HIAREIIERN
KRED