Gene Pisl_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1175 
Symbol 
ID4617305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1065736 
End bp1067688 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content45% 
IMG OID639784268 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_930686 
Protein GI119872679 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACAA TCTTGATAAA AAATATAAAT ATGTATATTA TTCTTGTTCT AATGAAAATA 
AGTTTCTTAA TAGGGGGTCC ACAAGGCAGA GGAGTAGAGA CTGCTTCTTT TATGTTCATA
TATGGCGTAG GCGCTGCGGG ATATTATGTA TACGCGCGAC GAGAGTTTTG GAGTAATATA
GCGGGAGGTC GCCATAGCTA TGTAGTTGGT ACAATCTCCG AAAACTGGCC CGCCCCAGCG
CCTGGAAACA GCGTAGAGTT GGCGTTGACA TTCGACGGAC ATGCCGTATT AGAACATATC
CATCATCTAA AGAAAGGCAG CTTCCTCGTA TATAATACAG AAGAAGACCC CAAGACTCCA
GATAGTTATC AAATGCTCGC AAAACCCCTT GCGGAGAGAC TCAAAAAATT CGCTAAAGAA
CATGGGTTTG AACCGACGGT AAAGGGTTTT GTAGAATATC TAAGACAAAA CGGCGTTGAA
GTATTAGGGC TCCCCTATAA TAAACATATA AGCGAAATAG GAAGAAAAAT TGGTGTTACA
TCGCCGGTTA TGTTGGCTAG ATTTGTTAAC ACCTTTGTCG TAGCTCTCGG CGCGGCTCTT
CTAGGTCTTG ACGAGGAGTA TGTAGCTAGA GGCGTCGGTT TTGCCCTTGG CAGAAAGGCA
GAGGTGATAG AGCAAAATAA AAAAATCGCT GCCGAGGCCA TAAAACTCGT TGATAAGCGG
ATAACTACAC TTAAGCCCCG CAACCCTGGC GTTAAGCGGA TATTTTGGAA CGGCAATGAG
GCGTCTGGCT ACGGTAAGGT AGTTGGTGGG ATAAGATTTG TTGCATATTA CCCGATAACG
CCTGCCACAG ACGACGCAAT GACATTTGAA AGACTTATAC CATTTCCAGT GGATAGAAAC
GCAGGTGAGT TGGCAAAGTT TGAGAAAATC GGCGCAATGG CGTTTCAAGC TGAAGATGAA
CTATCAGCTA TAGCTATAGC TACCGGCGGC GCGATTGCAG GGGCAAGAGC TGCTACAGTC
ACGTCCGGCC CTGGCTTTAG TCTAATGGCG GAGGCGCTCT CAATGGCTGG AATGATGGAG
GTTGGGGTGG TGGTCACTGT ATGGATGCGC GCAGGGCCAA GTACAGGCCA AGCCACTAGA
CAAGCTCAAC AAGACCTTCT ATTCTCCCTC TTCATAGGCC ATGGCGAGTA TCCAAAAATC
GTATATGCCA GTGGAGACTT AGAGGAGGTG TTTCTTGACA ATATTAGAGT TGCAAATTGG
GCAGAACGCT ACCGCGTTCC AGTGATACAC CTCGTCGACA AAAATCTGTC TAACACATTC
GCAGTAATGC CGCTTCCAGA TCCTGCAAAA GTAAAGATAC AAACTGAAAA ACCAGTCGTC
TTCCCACAGA CAAAAGACGC AGAAGCATAT CCACTTGAAG AAATACTACC GCCTAAGTTA
CTACCAGGCA TCTCAAACGC AATTTTCCAC TTAAACAGCT TAGAACACGA TCCGGAGGGC
GATCCAGAAG AAGATCCCGT GGTTGTAACC AAGATGTTTG AAAGAAGAAT GGCAAAGCTA
AAGCTTATTG AAAGCGAGAT TTCACCAGAG GAGAAGGTGT TGTATTTTGG GCCTCAAGAC
GCCAAGAGGG TGATAGTGGG GTGGGGGTCT GTAAAACCCG CGGTTCTCAC AGCGCTTGAG
GAATTAAAAG ACGTCGGCTT TCTCTATGTT AAAATGCTTT ACCCATATCC AGTAGAACTC
GTTAAGAAAT ATCTACAGGG TAGGGAGACG CTCTTCATAG AAAATAATTA CCTAGGCCAA
CTCGCCATGA TTACCCAGAT GTTTGCCGGA ATAGAGCCGA CAGCTGTGGC TGTGAAGTTC
AACGGGAGAC CTATAACAAC AGATGATGTC ATCTACGCAT ACAGAAAATT TGTAGAAGGT
CAAAAGACTA TTAAAATAGA GACAGACTTA TGA
 
Protein sequence
MATILIKNIN MYIILVLMKI SFLIGGPQGR GVETASFMFI YGVGAAGYYV YARREFWSNI 
AGGRHSYVVG TISENWPAPA PGNSVELALT FDGHAVLEHI HHLKKGSFLV YNTEEDPKTP
DSYQMLAKPL AERLKKFAKE HGFEPTVKGF VEYLRQNGVE VLGLPYNKHI SEIGRKIGVT
SPVMLARFVN TFVVALGAAL LGLDEEYVAR GVGFALGRKA EVIEQNKKIA AEAIKLVDKR
ITTLKPRNPG VKRIFWNGNE ASGYGKVVGG IRFVAYYPIT PATDDAMTFE RLIPFPVDRN
AGELAKFEKI GAMAFQAEDE LSAIAIATGG AIAGARAATV TSGPGFSLMA EALSMAGMME
VGVVVTVWMR AGPSTGQATR QAQQDLLFSL FIGHGEYPKI VYASGDLEEV FLDNIRVANW
AERYRVPVIH LVDKNLSNTF AVMPLPDPAK VKIQTEKPVV FPQTKDAEAY PLEEILPPKL
LPGISNAIFH LNSLEHDPEG DPEEDPVVVT KMFERRMAKL KLIESEISPE EKVLYFGPQD
AKRVIVGWGS VKPAVLTALE ELKDVGFLYV KMLYPYPVEL VKKYLQGRET LFIENNYLGQ
LAMITQMFAG IEPTAVAVKF NGRPITTDDV IYAYRKFVEG QKTIKIETDL