Gene Pisl_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1167 
Symbol 
ID4616334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1057702 
End bp1059111 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content58% 
IMG OID639784260 
Productradical SAM domain-containing protein 
Protein accessionYP_930678 
Protein GI119872671 
COG category[B] Chromatin structure and dynamics
[K] Transcription 
COG ID[COG1243] Histone acetyltransferase 
TIGRFAM ID[TIGR01211] histone acetyltransferase, ELP3 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.413437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.627812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAGC CTCTGCGGTT TATTAGGATG GCCAGTGGGG TTCACGTAGT TGCCGTGATG 
ACGCATCCCT TTCCCTGCCC GGGGAGGTGT AGCTTTTGCC CCTCTGCGGC TGGGGTTCCC
AAGTCGTATA TGCCGGATAG TCCGGTGGTT TTGAGGGCTG GGCGTAGTGG TTTTGACCCC
TACCGGCAGG TGGTGGGGCG GGTGAAGGTG TATCTCGACA ACGGCCACAT GCCCTCTAAG
GTGGAGGTGG TGGTTATGGG CGGGACCTTC TCGGCTTTGC CTAGGTGGTA TAGGGAGTGG
TTTATTGGCA ACGTGTTTAA GGCTCTCAAC GACTACCCCA GCTGGGCGGC TGGGGCCGAC
CCTTCGCCTG ACCTCGAGCT TGAGCAGCGG CGTAACGAGG GGGCGCGGAT CCGGCTGGTG
GCTTTGACTG TGGAGACGCG CCCCGACTAC GTCGACGTGG GAGAGGTGGA CTTCCTCCTT
AGGCTTGGGG TGACGCGGGT AGAGCTGGGA GTCCAGTCTA TCTACGACGA CGTGTTGGCC
CGGGTCGATA GAGGCCACGG CGTTGCCGAG GTGGTGAGAG CCACGGCGCT TCTGAAGGAC
TCGGCGTATA AGGTGTGTTA CCACCTAATG CCGGGGCTCC CCGGAAGCGA CCCGGACCGC
GACCTGGAGA TGTTTAGGGA GGTTTTTTCA AATCCAGACT TCATGCCGGA CTGCGTCAAG
ATATATCCCA CGTACGTCGT CCCCGGGACG AGGCTGTATG AGGAGTGGAG GCGGGGCGGC
TATAGGAGCT ACGGCGAGGA TACGTGGCTC GATCTGTTGG CGAAAATCTA CGCCTCTGTG
CCGAGGTGGG CCAGGGTTAT GAGGCTGGGG AGGGATATAC CTCTGCACCA TGTCGTCGAC
GGCCCGAGGT GGGGCAATAT GAGACAGGTG GTGCTTAAGC GGATGGAGCA GCTAGGTCTT
AAATGTGTCG AAATAAGGTG TAGAGAGGTT GGCATAAAGC TTGCCAACGG CGTTTACGTA
GAGCCGGGGC CTGTGGAAAT AAAGAGACAT ATCTATGAAG CTTCTCGCGG CGTGGAGGTC
TTTTTAGAGG CTGTGGGGCC GGACGACACT CTATATGGCA TACTTAGGCT GAGGATGCCG
TATAAGCCGC ATAGGCCGGA GCTCGTTGGG CAGACGGCGT TGGTGAGAGA AATACATGTA
TATGGCCCAG AGGTGCCGGT GGGGGAGGAG GGGGTCTGGT GGCAGCACGT GGGCATAGGC
AGATCTCTCA TGGAGAGGGC TGAGGAAATT GCCGCGTTGG AGTTCTCAGC AAAGAAAGTC
GCTGTGATAA GCGGCGTGGG GGCCAGGCCC TACTTCAGGA AGCTCGGCTA TGAGAGATGT
GGCCCCTACA TGTGTAAAGA GCTTAGATAA
 
Protein sequence
MEKPLRFIRM ASGVHVVAVM THPFPCPGRC SFCPSAAGVP KSYMPDSPVV LRAGRSGFDP 
YRQVVGRVKV YLDNGHMPSK VEVVVMGGTF SALPRWYREW FIGNVFKALN DYPSWAAGAD
PSPDLELEQR RNEGARIRLV ALTVETRPDY VDVGEVDFLL RLGVTRVELG VQSIYDDVLA
RVDRGHGVAE VVRATALLKD SAYKVCYHLM PGLPGSDPDR DLEMFREVFS NPDFMPDCVK
IYPTYVVPGT RLYEEWRRGG YRSYGEDTWL DLLAKIYASV PRWARVMRLG RDIPLHHVVD
GPRWGNMRQV VLKRMEQLGL KCVEIRCREV GIKLANGVYV EPGPVEIKRH IYEASRGVEV
FLEAVGPDDT LYGILRLRMP YKPHRPELVG QTALVREIHV YGPEVPVGEE GVWWQHVGIG
RSLMERAEEI AALEFSAKKV AVISGVGARP YFRKLGYERC GPYMCKELR