Gene Pisl_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1156 
Symbol 
ID4617805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1047953 
End bp1050493 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content66% 
IMG OID639784252 
Producthypothetical protein 
Protein accessionYP_930670 
Protein GI119872663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000505195 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGTGGC TTGTTCCTCT TCTGCTGGCG GCTCTGGCCT TCGCCTACGT GGTCCCCTCG 
GAGGGTCTCG ACGTCTACTG GTGGGCCGCG CCCGACAGGG TGGCCGGCGT CGGCATAGAT
GGGAGAACTC TGTGGCAGAT CGACGCGGTT TTTCCCCTGG CGGCGACGGA CTCGGTGGGG
AGGTGTGTGG CGGTGGTTAA CAGGCCGTAT CTCTACGTGG TGAGGCAACA GCCTATGGAG
CTTAGGGTTT CTATTCCGGC TACTGTCCAG CTTTCTCCTG ATCTCGTCAG CACTTTGAGC
CAGTACGGCA TCTCCTTCCC CAGCGCGGTT AACGTGGTGC TTAACTTCAC AATCCCTCTT
CCACCGCTTG TTTTGACGAG CGTCTACAAG ACGTCGGTTG CCTCGCTTCA CACGCCTTAT
GGCTACCCCC TGTGGGCCGT CTCGCTTGGG CCTAGGGTGA ACGCCACCGC CGTAGCCACA
AACTGCCGGG ATGTGGCCGT GGGGACGATT TCGGGGGAGG TCTACGTGCT TAGGGATGGG
AAGGTGTACG CCGTGTATAC ATACGGCGAG CCGGTGACCG CGCTTGCCTA CGGCCGGGAC
GTCTTGTACG TCGGCACCGC CGGGGGCAAG ATCTACGCCG GGGGGAGCCT CGTCGGGTCG
TGCTCCGGTT CTGTGTACTA CCTCACAGTG AGGCCGGACG GGAGCCCCGT GGCGCTCTGC
TTCTCCAAGG GGGCGGCCCC CACGGTCGAG TACTACCCCT ACGGCGTTAG GCTGACCCCC
TCCTCCTACG TGGACTACGG GATAGATACG CCGAAGGTGC CGGCGGCGCT GAGCCAAGAC
GGCTCTCTCT TCGTCGCGGC TACCCAGGGC TACGTGGTGG CGTTTAGCGG GGGGCGCGAG
CTGTGGAGGG CGAAGGCCCC CTCTCTGCCC ACGGCGGTGG CGGCCTCCAA CAACGGGTCT
ATCGTCGTCG TGGGCACCCT AGGCGGCGAC GTCTTGGTGT ACTGGAACGG GAGGGAGGCG
GCGAGGTTCC TCGGCTCGGC CCCCGTCACC TCCGTCGCCG TATCCGCCGA CGGGAGGGCC
CTGGCGGTGG AGCGGTGGGA CACGGTCTCC GGCTTTAGGA TCGCCTTCGC CGCGGTGCGC
GTCTCGGCGC CTCCCGAGTG CCTCCCCGCC GAGGTGCAGG TGGTGGTGGG CGGCTCGGTG
TATAGGTATC TGGTGTCCGG CTCCGGCGTG GTGCTCCTTC CTGTAGGCGA CGTGACGGTG
GCGCCCCAGT ACAAATACCT AGGCGACTTC AGATGCCGCC CCCTCGGCAA CGTGACGTTG
GCGGTGAGGG GGGACCTGGA GAGCCCCATC GAGATAGGCT ACGTCAAGGA GTATAGGGTG
CACCTCTCCC CTCCGAACAT AACGAGGGGC CCCGCCTGGG CCGCGGGGCC AGCCACCTTC
TTCGCAGAGC CCAGCGTAAA CGTGCCGGTC TACAACTCGC CGGTTTCCTC CGGCCGTCTC
GTCCTAGCGG GCTGGGAGGT AGACGGCAGG AGGATAGATC TGCCGACCCC CACCCTCTCC
GTCAACGTGG CTGGGCCGAC GACGGTCAAG GCCATATACA GGGTGGAGCT GCCCCAGGCC
GTGCCTATAG ACGAGCAGAG GCGCTACTGG CTGAAGACCG TGCTGGTCTT CGACGCCTTT
GGGAACCCTG TGGCCTCCGG CGTAGCCCCC GAGGTGTCCA CCTACCCGGT GGTGGTGAGG
GGGGTCTACG TCGAGCAGTA CAGGGTGCGC ACCTACTACC CCGCCACTGT CAACGGCTCC
GACACGCTGT GGGCCGAGGC CGGGACTAAG GCGGTGTTTT ACGCCCCCGA CGTGGAGTTT
AGAAACGGGA CGAGGCTTGC CTTCGTCAGG TGGAGGGAGG CCGAGTCGAG GGAGCGGACT
CTTGCCGTCA CCGTTGAGAG GCCGGTTACG CTTACGCCCA TATACGTCAC TCAGTACAGG
GTGTGGGTGA AGCCGCCGGC TCAGGTGGTG GAGCCGCCAA ACGCCACTTG GGCAGACCGC
GGCTCTGTGA TAAAGGTGGC GGCGCCCCCC GTGTTGAACC AGAGCGGCAA CGTCAGAACT
GTGGTTGGGC AGTGGCTGGT TAACGGCCTT CCCAACGCCA CGGGCGCCGC AGCGTCGTTT
AGGGTGACGG CGCCGCTCAA CATAACCTAC GTAACGAAGA GGCAGTACTT GGTGACCTTC
GTCTCGGCCT ACGGCACGCC GCCCCCGCCC ATGTGGGTCG ACGAGGGGTC CACGGCGTCT
GCGGTGCCTA CGCCGATGGA CGTCTGGTCG CCCCCGCCGC TGCACTGGAA GTTCGCCGGC
TGGAGAGACA AGGCGACGGG CACCGTCTAC AGCTACCCCC AGATGCCCTA CGTCTACGGG
CCCGCTACCT TCGAGGCCGT CTGGGCCCTA GACCCATTGC CTCTAGCCGC AATAGGCGGC
GGGGCGGCCG CGGCAGCGCT CGCCGTGTGG TTCATGAAGA GGAGGCGCCT GGCGAAGCTG
ATGGCCGAGG TGGCGGAGTA G
 
Protein sequence
MRWLVPLLLA ALAFAYVVPS EGLDVYWWAA PDRVAGVGID GRTLWQIDAV FPLAATDSVG 
RCVAVVNRPY LYVVRQQPME LRVSIPATVQ LSPDLVSTLS QYGISFPSAV NVVLNFTIPL
PPLVLTSVYK TSVASLHTPY GYPLWAVSLG PRVNATAVAT NCRDVAVGTI SGEVYVLRDG
KVYAVYTYGE PVTALAYGRD VLYVGTAGGK IYAGGSLVGS CSGSVYYLTV RPDGSPVALC
FSKGAAPTVE YYPYGVRLTP SSYVDYGIDT PKVPAALSQD GSLFVAATQG YVVAFSGGRE
LWRAKAPSLP TAVAASNNGS IVVVGTLGGD VLVYWNGREA ARFLGSAPVT SVAVSADGRA
LAVERWDTVS GFRIAFAAVR VSAPPECLPA EVQVVVGGSV YRYLVSGSGV VLLPVGDVTV
APQYKYLGDF RCRPLGNVTL AVRGDLESPI EIGYVKEYRV HLSPPNITRG PAWAAGPATF
FAEPSVNVPV YNSPVSSGRL VLAGWEVDGR RIDLPTPTLS VNVAGPTTVK AIYRVELPQA
VPIDEQRRYW LKTVLVFDAF GNPVASGVAP EVSTYPVVVR GVYVEQYRVR TYYPATVNGS
DTLWAEAGTK AVFYAPDVEF RNGTRLAFVR WREAESRERT LAVTVERPVT LTPIYVTQYR
VWVKPPAQVV EPPNATWADR GSVIKVAAPP VLNQSGNVRT VVGQWLVNGL PNATGAAASF
RVTAPLNITY VTKRQYLVTF VSAYGTPPPP MWVDEGSTAS AVPTPMDVWS PPPLHWKFAG
WRDKATGTVY SYPQMPYVYG PATFEAVWAL DPLPLAAIGG GAAAAALAVW FMKRRRLAKL
MAEVAE