| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1152 |
|---|
| Symbol | |
|---|
| ID | 4617459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1042203 |
|---|
| End bp | 1044245 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639784248 |
|---|
| Product | MCM family protein |
|---|
| Protein accession | YP_930666 |
|---|
| Protein GI | 119872659 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000000000211045 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTTG AGTTGGAGCT TGATCTTGTG AGGGATAAGA TTAGGGAGTT TATTACGTCT
AGTGAGAAGG TGTCGGACGA GGTTATCAAT ATGATTATCC AGCGGAAGAG GTCTCTTGAG
GTGGATTTCC ACGACATTCT TCTGTTTGAC AAGTCTCTTG CAGATCTCTT CGTCGAGAGG
CCTCGGCTTG TGTTGCCTGA GGCTGACAAG GTGGTGCAGG AGATTGTGGA GGAGAAGGAT
CCGGAGACTG CGAGGGCGCT TAGGCGGTTT CACTTCAGGG TTAGGGGGTC GCCGTTGGTT
GTTCCGCTTA GGAAGCTGAG GTCTGAGTAC ATCGGCCGGC TGATCCGCAT CGAGGGGATT
GTGACTAGAC AGACTCCGCC TAAGCACTTC CTCCACAGAG CGCTCTACCG GTGTACGCAG
TGTGGCTACG AGATCGAGCT TCTTCAAGAG CTGGAGAGAC ATGTGGAGCC CCCCGCCAAG
TGCCCCCGCT GTGGGGCCTC GAAAAGCTTT ACCCTTGTGA CTGAGCTGAG CCAGTACATA
GACTGGCAGA AAATTATCAT ACAGGAGAGG CCGGAGGACC TCCCGCCTGG CCAGTTGCCG
AGGAGTGTTG AAGTGGTGCT TCTAGACGAC CTCGTAGATA CTGTAAAACC TGGCGACATA
GTCTCTCTGA CAGGTATCGT CGATTTAACT CTCAGCGAGC TTAAGAAAGG GAGGCCGCCT
ATTGTGACAT CTTATATCCT GGGGACCCAC GTGGAGACTT CTAACAAAGA GCTTGTAGAA
GAAATCACAA AGGAGGACGA GCAACGGATT TTAGAGATCT CGCGTAGACC CGACGTGAGA
GAGCTCATAG TCCGCTCCAT CGCCCCCTCT ATATATGGCT ATGAGGAGAT AAAGGAGGCC
ATTGCTTGTC TTCTCTTTGG GGGGAATGAG ATTGTCTACC CCGATGGCGT TAGAGTGAGG
GGCGAGATAA ATATCTTGTT AATCGGCGAC CCTGGCACGG CGAAGTCGCA ATTGCTCAAG
TTTGTGGCTA AGATAGCGCC GAGGGCTGTC TACACGACGG GCAAGGGGTC GTCGGCGGCT
GGCCTCACGG CGGCTGTCGT GAGGGATAAG CTGACAGGCG AGTTCTACCT AGAGGCGGGG
GCCCTCGTGT TGGCCGACAG GGGGGTGGCA GTTATAGACG AGATCGACAA GATGGATGCC
AAAGACAGAG TGGCGCTCCA CGAGGCTATG GAGCAGAACA CCGTCTCGAT TAGCAAAGCC
GGCATAGTGG CTACTCTCAA CGCGCGGGCT GCCGTGTTAG CCGCCGCCAA CCCCGCCTTC
GGCCGGTACC TCCCCAACCG AACTGTAGCA GAGAACATCG ACCTCCCGGT GTCTTTGCTA
AGCCGCTTCG ACTTAATTTT CGTAATTAGA GACGAGCCTA GGGAGGACTT CGACGCCTCT
GTCGCCGGGC ATATCCTAGA TCTCCACTCT GGCAGAACTC CCGAGGCTTT TCGCGATGTT
CTAAGGCCCG ACTTCCTCCG CAAGTATATA ATATACGCCA GGAGGTATAT AAGACCTATC
TTGAGTGAGG AGGCCAAGGA GAAGATCAAG AGGTTTTATC TAGAAATGCG CCGTAGGTAC
CAGGGGCCTG GGACTGCCAT TGCCATTACG GCCCGCCAGC TGGAGGCCCT TATACGTCTC
ACAATAGCGG AGGCTAAGAT GAGGCTCTCT CCCGTCGCCA CTGGCGAAGA TGCTGAGAGA
GCTATCAAGC TATATCTCGC CTTTCTCAAA TCCGTAGGTA TAGACGTGGA ATCTGGGGCT
ATAGATATTG ATGCAGTTAT CACAGGCGTC CCCGCGTCGA GGAGAGAGGC ATATATAAAA
ATCGTTGAGC TTCTGAAAAA GCTGGAGGAG GTGGAGAGGG GGCCTGTCAA AATCGATTTG
CTAAAAGCCG AGGCGGAGAA ATTGGGCATT CCCGCGTCAG AGGTGCAGAG AGTTGTCGAT
TTGCTTATTC GCAACGGCGA GGCTTATACG CCGAGGCCTG GCTATATAAA GCGCGTTGTA
TAG
|
|---|
| Protein sequence | MTVELELDLV RDKIREFITS SEKVSDEVIN MIIQRKRSLE VDFHDILLFD KSLADLFVER
PRLVLPEADK VVQEIVEEKD PETARALRRF HFRVRGSPLV VPLRKLRSEY IGRLIRIEGI
VTRQTPPKHF LHRALYRCTQ CGYEIELLQE LERHVEPPAK CPRCGASKSF TLVTELSQYI
DWQKIIIQER PEDLPPGQLP RSVEVVLLDD LVDTVKPGDI VSLTGIVDLT LSELKKGRPP
IVTSYILGTH VETSNKELVE EITKEDEQRI LEISRRPDVR ELIVRSIAPS IYGYEEIKEA
IACLLFGGNE IVYPDGVRVR GEINILLIGD PGTAKSQLLK FVAKIAPRAV YTTGKGSSAA
GLTAAVVRDK LTGEFYLEAG ALVLADRGVA VIDEIDKMDA KDRVALHEAM EQNTVSISKA
GIVATLNARA AVLAAANPAF GRYLPNRTVA ENIDLPVSLL SRFDLIFVIR DEPREDFDAS
VAGHILDLHS GRTPEAFRDV LRPDFLRKYI IYARRYIRPI LSEEAKEKIK RFYLEMRRRY
QGPGTAIAIT ARQLEALIRL TIAEAKMRLS PVATGEDAER AIKLYLAFLK SVGIDVESGA
IDIDAVITGV PASRREAYIK IVELLKKLEE VERGPVKIDL LKAEAEKLGI PASEVQRVVD
LLIRNGEAYT PRPGYIKRVV
|
|---|
| |