Gene Pisl_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1133 
Symbol 
ID4617795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1027068 
End bp1027604 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content45% 
IMG OID639784229 
Producthypothetical protein 
Protein accessionYP_930647 
Protein GI119872640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000676168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTGG GCGAAGAGCT GTCGATACAT GAGCTAGAGA AACTTGACTT TGGCGAGGAC 
TTCAAGCTGG CCCTCTCTAG AGCTATAAAC GGGGCTAACG TCTATATCGT AGGCCCCTCT
GGAAGTGGAA AAACTGCCAT GTTGAGAAAA CTAGGCCTTT ATCTCACTAG GTTAGGCAGA
GAAGCTCTCT ATGTAAAACT CGAGTGGGTG AAATACGGCT GGGGGCTCTC AGACTATTTA
AAGAGGTATG GGGATAAAAG CAGAGAGCTT GTCGGAGGCG CCGCAGGCGA TATAATACTG
TTAGACGACG GAGAGTTGCT CTGGAGCTAC AGCTCGGTGT ATAGAAATCT AGTCAGAGAC
TTGAGAGGTA GACAAATAGC GGCGGCTTTT AGAGAATTTG ACATAGATAC AGCAACTATC
TTACTTGGAG ATGGATTTAC GATATATCTT CAGACTCGAC AAACCTCAGC CCATACGGCA
AAGATACCAC TTGGCTTAAG TTTCTTAGGT AAAACTGCAG AAATTACTGT ATTATAG
 
Protein sequence
MKLGEELSIH ELEKLDFGED FKLALSRAIN GANVYIVGPS GSGKTAMLRK LGLYLTRLGR 
EALYVKLEWV KYGWGLSDYL KRYGDKSREL VGGAAGDIIL LDDGELLWSY SSVYRNLVRD
LRGRQIAAAF REFDIDTATI LLGDGFTIYL QTRQTSAHTA KIPLGLSFLG KTAEITVL