Gene Pisl_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1129 
Symbol 
ID4616365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1024149 
End bp1024442 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content49% 
IMG OID639784225 
Producthypothetical protein 
Protein accessionYP_930643 
Protein GI119872636 
COG category[S] Function unknown 
COG ID[COG1888] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000200826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGGGATC GTCCGCCAAT ACGTCGTATT GTAATAGACG CCGCCATACC TACTAAAGGC 
GTCACTATAG TAGATGTGGC AAAAGAGCTT TACAAAGTAG AAGGCGTTAA AGCTGTACGT
GTTACAGTAG ACGACGTAGA CGTCGACGTG TTAGGTCTCG CCATTGTAGT AGAGGGCGTA
AACGTTGACT ACGACGAACT AGAGAAGGCT CTGGAGAAAG TCGGGGGTGT CGTACATTCA
ATAGATGAAG TTGTTGTAGG CGAGTATATA CCGGAGGCCG GGACGACGAC GTGA
 
Protein sequence
MGDRPPIRRI VIDAAIPTKG VTIVDVAKEL YKVEGVKAVR VTVDDVDVDV LGLAIVVEGV 
NVDYDELEKA LEKVGGVVHS IDEVVVGEYI PEAGTTT