Gene Pisl_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1123 
Symbol 
ID4616693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1019519 
End bp1020580 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content49% 
IMG OID639784217 
Producthypothetical protein 
Protein accessionYP_930637 
Protein GI119872630 
COG category[R] General function prediction only 
COG ID[COG1341] Predicted GTPase or GTP-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000483449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTACAG TAGTAGTACC ACAGGGCTAT ACGGCTCTTC TAAGAGGCCC CGCCACAGTG 
GAATGTCGAG AGCCATGTAG AGTATTCGGC GGCGTCTTCC ACAGATTTGA AATCCCCCCT
CACAAACAAT ATCCCGTCGA AGGCCCTGCG GTTTTTACAA TAGAAAGCGG CGTAGTGGCT
ATTGTAAACG GATCTGCCAT ACCGCAAGAT TGGCATTTAG AACTCAGCGG CGTAGTCGCA
CTAGTCGGGC CGACAGACGC GGGGAAGAGT AGCCTATCTA CATACTTAGT AAATATACAC
ACTTCCCAAG GCAAAAAGGT ATGTATAGTC GATGCAGACG TAGGCCAGTC AGACATAGGG
CCGCCTGGTT TTGTATCCTA TAGTTGTACC ACATCCCCCA TCCCACATAT CTCGGAGCTA
GAGCCATACG ACGCATATTT CGTCGGTACG ACAAATCTCC AGGGAGTCGA GGAGTTACTT
GTGGCAGGGG TTGTCTGGGG AGTCAGAAGA TCTATTGCGC AATACCCCCA CCTAGTTGTA
ATAAACACCC CCGGGTGGAC CACAGGCAGA GGTCTCCAAC TACTTAGGGC TGTAGTCGAC
GCAGTAGAGC CAACAGTGAT AAACATTGGA GAGGCCGCCC TTCCCGGCCG CCTCATATCT
AAACCACGCC ATGTCCTCCC CCGCGGCCCA CAAGAGAGGA GAGAATTGCG AAATTTATCA
TACAGAAGAC ATGTAAAACT CATAGAAAAG ACTCAGATAG ATCTAGAAAA AATGGCTGTT
TGTAAGTGGG AGAAGGGGCT CGTCTGTCCT TGGGGGAGAT ACACCCCCGC CGACGTTAGC
GAGCCTCAGA AAAAAGGCCG TGAGTTTATA GTGCCGCACC ACTATTTAAG ACATATATTC
GCCGCTTTGT ATAAAAACGG GAAGTTGGTT GGATACGCCA TAGTGGAAAA ATTCGAGCCT
AAGATAGTCG CATATGTAAC AACAACAGAC TTTGACGAGA TACGTATTGG AAAAATCAGG
TTAGACCCCC AGACTCTAGA AGAGCTAGAG CCGTTACCCT AG
 
Protein sequence
MSTVVVPQGY TALLRGPATV ECREPCRVFG GVFHRFEIPP HKQYPVEGPA VFTIESGVVA 
IVNGSAIPQD WHLELSGVVA LVGPTDAGKS SLSTYLVNIH TSQGKKVCIV DADVGQSDIG
PPGFVSYSCT TSPIPHISEL EPYDAYFVGT TNLQGVEELL VAGVVWGVRR SIAQYPHLVV
INTPGWTTGR GLQLLRAVVD AVEPTVINIG EAALPGRLIS KPRHVLPRGP QERRELRNLS
YRRHVKLIEK TQIDLEKMAV CKWEKGLVCP WGRYTPADVS EPQKKGREFI VPHHYLRHIF
AALYKNGKLV GYAIVEKFEP KIVAYVTTTD FDEIRIGKIR LDPQTLEELE PLP