Gene Pisl_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1119 
Symbol 
ID4617399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1017160 
End bp1017837 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID639784213 
Productnucleotidyl transferase 
Protein accessionYP_930633 
Protein GI119872626 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0230664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCTG TAATTCTGGC GGCCGGCCTC GGCACTAGGT TAAGACCGTT GACTTTTCTA 
GTGCCTAAAG CTCTAGTTAC AATTGGGACA AAGCCCCTCG TTGATTATGT TATCGAGTGG
CTTAGGTTAA ACGGCGTGAG AGATATAGCT GTCGTGGGGT ACCATATGCA AGATGTGTTA
GAGAGATATC TCTCGCAGTT TCACCCAGAT GTAGTTTTCT TCAAGTCGCG GAAGTTGCTT
GGGACCGCCG GCCAGTTGTA TTATACAAAA GAGTGGGCCG ACGGCGACGT CGTTGTTGTT
AATACAGACG TGTTGACAAA CCTAGATTTA AAAAAACCGG CTGAGCTTCA CAAATCTAGG
GGAGCTCTCC TAACTATTGT CGGACAGATA CACAAGGTCT CCCTACGCTT TGGGGTTTTG
GAGGTAGACG GCGGGATGTT GAAGTCTTGG AGAGAAAAGC CGAGTTTTGA ATATATAACG
TCAACAGGAG TTTACATAAT CTCTGACAAA GTTATAAAAA AGTTGGGGGA GGAGTATTTA
GATATGGACG CCCTTGCCAA ATCGCTTATT CCAAACGTAG CTGTTTATGT GGCTAAAGAG
GCGTTTTTCT ACGACGTGGG GACGTTAGAA GATTTGGCAA AAATACAGGA GGTAAGACTA
GAGAGTTTGA AGCCGTAA
 
Protein sequence
MKAVILAAGL GTRLRPLTFL VPKALVTIGT KPLVDYVIEW LRLNGVRDIA VVGYHMQDVL 
ERYLSQFHPD VVFFKSRKLL GTAGQLYYTK EWADGDVVVV NTDVLTNLDL KKPAELHKSR
GALLTIVGQI HKVSLRFGVL EVDGGMLKSW REKPSFEYIT STGVYIISDK VIKKLGEEYL
DMDALAKSLI PNVAVYVAKE AFFYDVGTLE DLAKIQEVRL ESLKP