Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1119 |
Symbol | |
ID | 4617399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1017160 |
End bp | 1017837 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639784213 |
Product | nucleotidyl transferase |
Protein accession | YP_930633 |
Protein GI | 119872626 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0230664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCTG TAATTCTGGC GGCCGGCCTC GGCACTAGGT TAAGACCGTT GACTTTTCTA GTGCCTAAAG CTCTAGTTAC AATTGGGACA AAGCCCCTCG TTGATTATGT TATCGAGTGG CTTAGGTTAA ACGGCGTGAG AGATATAGCT GTCGTGGGGT ACCATATGCA AGATGTGTTA GAGAGATATC TCTCGCAGTT TCACCCAGAT GTAGTTTTCT TCAAGTCGCG GAAGTTGCTT GGGACCGCCG GCCAGTTGTA TTATACAAAA GAGTGGGCCG ACGGCGACGT CGTTGTTGTT AATACAGACG TGTTGACAAA CCTAGATTTA AAAAAACCGG CTGAGCTTCA CAAATCTAGG GGAGCTCTCC TAACTATTGT CGGACAGATA CACAAGGTCT CCCTACGCTT TGGGGTTTTG GAGGTAGACG GCGGGATGTT GAAGTCTTGG AGAGAAAAGC CGAGTTTTGA ATATATAACG TCAACAGGAG TTTACATAAT CTCTGACAAA GTTATAAAAA AGTTGGGGGA GGAGTATTTA GATATGGACG CCCTTGCCAA ATCGCTTATT CCAAACGTAG CTGTTTATGT GGCTAAAGAG GCGTTTTTCT ACGACGTGGG GACGTTAGAA GATTTGGCAA AAATACAGGA GGTAAGACTA GAGAGTTTGA AGCCGTAA
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Protein sequence | MKAVILAAGL GTRLRPLTFL VPKALVTIGT KPLVDYVIEW LRLNGVRDIA VVGYHMQDVL ERYLSQFHPD VVFFKSRKLL GTAGQLYYTK EWADGDVVVV NTDVLTNLDL KKPAELHKSR GALLTIVGQI HKVSLRFGVL EVDGGMLKSW REKPSFEYIT STGVYIISDK VIKKLGEEYL DMDALAKSLI PNVAVYVAKE AFFYDVGTLE DLAKIQEVRL ESLKP
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