Gene Pisl_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1116 
Symbol 
ID4617542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1015352 
End bp1015843 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID639784210 
Producthypothetical protein 
Protein accessionYP_930630 
Protein GI119872623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.214433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTCC AAAAGATGTT AGAAATTAGG AAGATACTAG AGGAGAAGAT CGCCCAGCTA 
CAGCAAGAGC TCAAGCTCTA CACCGCCCTA TTGGAGATTT TAGACAAGTC TATTGGAGAG
AAGTCTTTCT CCACGGCGGC GCAAGTGGCA AAGCCAGAGG CTGTGGAAGA GGTAAAAGGT
AGAGGCGGCG AGATATATGC AACTGTAGAG GTGTATAGAG ACTATCTCTA TATTAAGTTC
AAGGAGCCGG TGAAATTAGA CGGCCTCTTC AAGAGGTTTT TCCTTGACAA ATTCCTACAG
AAGTATAGAG AGGAAGACGC AAAAGAGGTC AGACAGGGGT CGCTAAAACA AGAGGAGGTG
CTTAGGTATG AGCTAGAGGG CGGCGAGACT GAGACAACAG CGATGAAGAT ATATAACTAT
AGAACTGAAG AGAGGAGGCG GGAAATACTT AGGGTTTTGA GATGGACGCT TGAGAAAGTC
TACTCGGGCT GA
 
Protein sequence
MDVQKMLEIR KILEEKIAQL QQELKLYTAL LEILDKSIGE KSFSTAAQVA KPEAVEEVKG 
RGGEIYATVE VYRDYLYIKF KEPVKLDGLF KRFFLDKFLQ KYREEDAKEV RQGSLKQEEV
LRYELEGGET ETTAMKIYNY RTEERRREIL RVLRWTLEKV YSG