Gene Pisl_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1110 
Symbol 
ID4617358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1001698 
End bp1003614 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content45% 
IMG OID639784204 
Producthypothetical protein 
Protein accessionYP_930624 
Protein GI119872617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG AAATACTTCT ACTCACCCTG GGGCTAATCC TAGTAGCCGT ATACTTCACG 
CCTCAACTCT ACACGCCACC CGAAACAACT CACGAAACTA CACGCTCTAC AACTCTGATT
ACTCCAACGT CAACAACTAC TCCGACATCT CCAGCTCCCA AACCTATTGA AACTACCACT
ACGACTACGG AAAAACCGCA GATGACTAAG CCCAACGCTG TATATCTGCC GGACATAAGA
GTAGAGGTAT TGGTGCCGCA AACAATAAAC ACGACCACAC TACCACTTCG GATAAATTAC
ACTATAGTAA TAAGAAATGT AGGGAATGGC ACGGGGACTG TAATCATATG GGATAAACCG
TATAAAATAG CGCCTGGAGA GACGCTGAGG ATAAACTCAT CGCTATTAGC CAGATGGGCC
GGAGACTATA CCGTAGAGAC TGTGATAAAC GGCAGTAAGC ATATGAAAGT TATTAAAGTA
TACTATTACA GAGAAAGGCT AGAGGCCACG CCGCTTTATA TCAATGTAAC AAAGTTACCC
GCCGTGGTAA CAACAGGCGT GAGAATTAAA AATGTCGGCA ATCTCACGGC GTGGGTAGAG
GGGGTTGAGA TAAAGCCGGG GGAAGAAAAG GTAATAAACA AAACGCTTAA AATCGACGCG
GCGGGAGCCT ACGTTGTAAA TGTTGGCGGA GTGGCCGTGC CCGTAATGGT TAGTTACTAC
GCGGCAAACG TTCTATGGAA AATCGGAGGT CAAGGAGACG TAGAGGCAGT GCCAGGTGAG
ACCTATACAG CGTGGCTCTG GATAAAAAAC GTGGGAAACG CCACAGCGAA TTTAGACATA
GATGGCAGAG CCGTGACGCT AAAGCCACAA GAGGAGGCGA ACATATCAAA AGCTGTTACT
ATATCGGCAG CAGGTTTATA CACGGTGAAG TTTAGAATAA GTGGAGACTT AAATACGACG
CTATATTACG GAATAAGAGC CAGGGTTATA GCCCCCAGAG TTGAGATTGT TATATGGAGC
CCAGAGCTGA GGAGAAGCTG GCCACTTCCA AATTCGACAG ATGAGACATC TGTATCAAGC
ATTGGAAAGA CTCTGGCTTT GACCTGGGGC TACGTAATTA CCACAAACGC CACAAAGAGA
ACGGTCAACC TAGCTGTGGA AGATCCAGAG GGAGTTAAGT ATTATAGCTT GTCGCCAGGT
GAGACAATAG CAAAAAACTT TACAACTACT GTACAAGCTC CTGGCGAAAC CACGCTAGAG
GTTAAGGTAA ATTCTACAAA ATATAGCTTA AAAACAGCTG TTCAATTAAT CCCTCCAAAA
ATAACGGTAA AAGACATCTT AAAAATAGAG TTTGAAGACG GTAGAAAACT CTTAGGCTTG
AAAATAAGCT GTAGAGCAGG TAGTGTAGCC ACTGACGTTG TACTAGATAT GTTAAGAGTT
TCAGGCGTGC TTACTTATAC ACAGACGGGC AGGGCTATAT ATGGGGATTT AACAGTAAAT
TCAGCACGTG GCATCTCTAC GGGGGACTAT AGAGGAAAAA TCGAGGGAAT AAGCGGCCAA
CTCACGCTAA ATATAGCTGG GCATAATATA TACCTGGAAT TCACTACAGC TCCGTTATCA
TTAACCAGAG TTTTATTTGA CGGTGCTCAA TACAGTTGTA ACGTACCCAC GGAGCTCGTG
CCGCCTATTC TGTACAAAGA CAAACCAACC GCCGCCGACG AGTTTGCTAC AGAGTATGTC
TACCGACTAC TTTCATCATT TGCAAGAACC GACAGTGATA GACCCCAGTC AATAGTTTGG
AACGGAGATT ACGTAGAGGT AATAGACAAG GGAGGAAACC TCTTGAGAGT ATACATAAGG
AGAGGCGAAA TACAGATAGA AGGAGCTCTC ACAGCGACTA TCGTAATATC ACAATAG
 
Protein sequence
MKKEILLLTL GLILVAVYFT PQLYTPPETT HETTRSTTLI TPTSTTTPTS PAPKPIETTT 
TTTEKPQMTK PNAVYLPDIR VEVLVPQTIN TTTLPLRINY TIVIRNVGNG TGTVIIWDKP
YKIAPGETLR INSSLLARWA GDYTVETVIN GSKHMKVIKV YYYRERLEAT PLYINVTKLP
AVVTTGVRIK NVGNLTAWVE GVEIKPGEEK VINKTLKIDA AGAYVVNVGG VAVPVMVSYY
AANVLWKIGG QGDVEAVPGE TYTAWLWIKN VGNATANLDI DGRAVTLKPQ EEANISKAVT
ISAAGLYTVK FRISGDLNTT LYYGIRARVI APRVEIVIWS PELRRSWPLP NSTDETSVSS
IGKTLALTWG YVITTNATKR TVNLAVEDPE GVKYYSLSPG ETIAKNFTTT VQAPGETTLE
VKVNSTKYSL KTAVQLIPPK ITVKDILKIE FEDGRKLLGL KISCRAGSVA TDVVLDMLRV
SGVLTYTQTG RAIYGDLTVN SARGISTGDY RGKIEGISGQ LTLNIAGHNI YLEFTTAPLS
LTRVLFDGAQ YSCNVPTELV PPILYKDKPT AADEFATEYV YRLLSSFART DSDRPQSIVW
NGDYVEVIDK GGNLLRVYIR RGEIQIEGAL TATIVISQ