Gene Pisl_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1108 
SymbolcysS 
ID4618166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp996669 
End bp998090 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content56% 
IMG OID639784202 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_930622 
Protein GI119872615 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.917766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATCT ACAACACCGC CACTAGACAG GTGGAGGAGT TCACAACGTA CGTCCCCCGC 
CTGGCCAGGG GGTACGTCTG TGGCATAACC CCCTACGACC ACATGCACGT GGGACACGGC
AGAGTGTATG TCTTCTTCGA CATATTCAGG AGGTATCTAG AGAGACTTGG CTATGAGGTT
AGGCTCGTTA TAAACTTTAC AGACATAGAC GACAAGATTA TAAACAGAGC AAAAGAGGAG
TTCGGCCACG AGGCGTACAA AAGGTGGAGG GAGATCCCCG AGCGCTACAT AGCCGAGTAC
TTCGAGATGA CGAAAAAACT CTACATAAAG CCGGCGTATG CATACCCCAG GGTGACAGAA
AACGTAGAAG ACATGGTGAA GTGGATATCG ACTCTCGTGG AGAAGGGATA CGCCTACGTC
GCCCCCGACG GCTCTGTCTA CTTCGAAGTG GCGAAGGTGC CTAACTACGG CGTGTTGTCG
AGACAGAAGA TAGAGGAGCT CGTGGCGGGG GCCCGCGTCG AGCCAGAGCC CGGCAAGAGA
AACCCCCTCG ACTTCGCCCT CTGGAAGAGC TGGACCCCCG GCGAGCCTTG GTGGGACTCG
CCGTGGTGCC CCGGGAGGCC CGGGTGGCAC CTCGAATGTG TCGTCATGTC GACAAAACAC
CTGGGGGCGC CCTTCGATTT CCACGGCGGC GGCGCCGACC TCATATTTCC ACACCACGAA
AACGAGATAG CGATAGCGAG GGCCTACTTC GGCGTAGACA ACTTCGCGAG GTATTGGATA
CACGTGGGCT ACCTCACTGT TAGAGGCGAG AAGATGTCTA AATCCCTCGG CAACATAATA
ACGCTGAGGG AGGTCCTCTC TAAACACAGC GGCGAGGCCC TAAGGCTTGC ATACGCCATG
AGCCACTACA GAAAGCCGAT GGAGTTCACC TACGAGCTGT TGCAACAGGC GGAGGACATG
GCGAAGACCC TCTACACCGC CTACGACGAG TTGAGCCAAG CCCTCCGAGA CGCCGGGGAG
AAAGACCAAG AACCCCTCGC CCAAGAGGCG TTGAAATACG CCGAGGCCTT CTACGGCGCG
TTAGACGACG ATATGTCGAC GCCGGAGGCC GTACAACAGC TATACGGCAT GGCTAGGTAC
ATAATCTCCA CGGTTTTACA CAAGATCGAG AAGATTTCGC GCGAGACGGC GCTAACCATA
TTGAACAAAT ACGTAGAGAT GGCGGACGTC CTAGGCGTGC TGGAAAGACG CCAGATCCCA
AAGGAGCTGG AGGAGGTCGT AAAAACGCTG GTAGAGGTTA GGGCAAAACT ACGCCAAGAG
CGGCAGTACC AGCTGGCGGA CTATATCAGG CAGAGGCTGG CTGAGCTCGG CGTAGAACTA
CACGACTTCG GCCCAAGGAC TTATTACACA TATAGGCGAT AG
 
Protein sequence
MRIYNTATRQ VEEFTTYVPR LARGYVCGIT PYDHMHVGHG RVYVFFDIFR RYLERLGYEV 
RLVINFTDID DKIINRAKEE FGHEAYKRWR EIPERYIAEY FEMTKKLYIK PAYAYPRVTE
NVEDMVKWIS TLVEKGYAYV APDGSVYFEV AKVPNYGVLS RQKIEELVAG ARVEPEPGKR
NPLDFALWKS WTPGEPWWDS PWCPGRPGWH LECVVMSTKH LGAPFDFHGG GADLIFPHHE
NEIAIARAYF GVDNFARYWI HVGYLTVRGE KMSKSLGNII TLREVLSKHS GEALRLAYAM
SHYRKPMEFT YELLQQAEDM AKTLYTAYDE LSQALRDAGE KDQEPLAQEA LKYAEAFYGA
LDDDMSTPEA VQQLYGMARY IISTVLHKIE KISRETALTI LNKYVEMADV LGVLERRQIP
KELEEVVKTL VEVRAKLRQE RQYQLADYIR QRLAELGVEL HDFGPRTYYT YRR