Gene Pisl_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1088 
Symbol 
ID4617919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp977664 
End bp978602 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content40% 
IMG OID639784183 
Producthypothetical protein 
Protein accessionYP_930603 
Protein GI119872596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTACTG CGGAAGATGT TAGGAGGCGA ATTGTAGAAC ATGGCTTGTC TATACGTGAT 
AGAGTTGTGG AAAATCTTCC ATATAGCTAT AGTGTTATGG TAGAACAGAT AAAGTCAATA
TCGCGCACAT ATAAGGGTGA TTTCGATACA TTTTTCTCAA GTCTATCTAA CATCAAAGGA
CTTGACCTAT TGATAATATA TGTCATGCTT GTAGCATTAC TAAGTAGATA TAAGGCGCTT
AAAGATGATG AACTAAGAAG TCTATCGGCC GCGTTTGAAA AACACATATA TGACGTAATT
TCTGCGTCAA AACTACGTAG GGTACTTGAA GAAGCCAGTG TAGAAAAAGA GATTTCAAAC
GAGACAATTT CGGATCTTTT GAGGTCGCTA AACATAGTAA GCAATAAACA TAGCACGCTT
TATGCTTGGA TAGCTAAACA ACGGAGACTG TCTAAATTTG AAGATGAGGT TAGAAAGATA
ATCTTTAAAG GTCGGGGAGG CAGCCGCGTT AGTAGAGGAG CGAGACTCTT CATACGCATT
TTTATACATG AAACAAATAT ACCCCTGGCG TTTAAGATTG TCCATACGCC TGAATACAAA
AAATATATAC TCCATGGAGA TATGTATACG GCGTTAGTTA CTTTGAGATC AGGCGCTTTT
GAAGATATAC CTACTCTTAC TTCAGAGAGG ATAAAAGCGA GGATTGCCAA GAGGATCCTC
TGTGAAGCTA GAGAGGGGGG GTCTAGATGT CGCGATGTAG TATTTAGACT AGAGAGCATA
CGCGGCTTGA TTAGACACGT GGGAAAAATA AGCGGTGACC CCATACTATA TGAGAGGGGG
GCTTATGACA TTGGCATGAA ATATTGTAAA GAGCTTAAAT GCGACACATG CCCTCTGAGA
GATATGTGTA AACGCTATAT CTTTATCAAG CTCAAGTAG
 
Protein sequence
MPTAEDVRRR IVEHGLSIRD RVVENLPYSY SVMVEQIKSI SRTYKGDFDT FFSSLSNIKG 
LDLLIIYVML VALLSRYKAL KDDELRSLSA AFEKHIYDVI SASKLRRVLE EASVEKEISN
ETISDLLRSL NIVSNKHSTL YAWIAKQRRL SKFEDEVRKI IFKGRGGSRV SRGARLFIRI
FIHETNIPLA FKIVHTPEYK KYILHGDMYT ALVTLRSGAF EDIPTLTSER IKARIAKRIL
CEAREGGSRC RDVVFRLESI RGLIRHVGKI SGDPILYERG AYDIGMKYCK ELKCDTCPLR
DMCKRYIFIK LK