Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1076 |
Symbol | |
ID | 4617408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 971420 |
End bp | 971905 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639784172 |
Product | XRE family transcriptional regulator |
Protein accession | YP_930592 |
Protein GI | 119872585 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATTGTG AAATATGTGG GAGGCCCATA GAGGGCGAGC CTATACCGAT AGAGGTAGAT AAAGCTGTAC TGTACGTATG TAAAAGTTGT GCAGCTAGAT ATGGTAAAAG AGTGTCGCCG CAGCTACAAC AAGCAGTTCA AAAGAAGACG CCGCCACGGC CTAAATCTGC AACTCCCCGC CTACAGTCTC TCGATGTGGA TCTTGTGGAA AATTTTGGAG AAGTTATTAA AAGAGCTAGA GAGAATCTTG GCCTCTCTAG AGAGGCTCTT GCAGCTATGT TAGGCATTAA GGAGGCTGTC TTAAGGAGGA TAGAATCCGG GCAGTTACAG CCCGATTTAG CATTAGCTAA GAAACTTGAG AAAACTCTTG GAGTAAAACT ACTGATAAAC ATAGCTGAAG AAGGCGCCAC TTCAGGGAGT GGTAGAATAG ATAGAGGTCT TACACTAGGC GAGGTAGCTG AGATTAGAGA TAGTGATGAG AAATAG
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Protein sequence | MYCEICGRPI EGEPIPIEVD KAVLYVCKSC AARYGKRVSP QLQQAVQKKT PPRPKSATPR LQSLDVDLVE NFGEVIKRAR ENLGLSREAL AAMLGIKEAV LRRIESGQLQ PDLALAKKLE KTLGVKLLIN IAEEGATSGS GRIDRGLTLG EVAEIRDSDE K
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