| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1055 |
|---|
| Symbol | |
|---|
| ID | 4617593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 948509 |
|---|
| End bp | 949336 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639784151 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_930571 |
|---|
| Protein GI | 119872564 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.525023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATAA ATTTATTTAC CTACGCAGTA ACTATTGTGG TTCTCCAAAT CGCTGAACAA
ATAATATTTG CCGTGTTGTT ACTTCTCGCC CTTATAATCC TAGTTACTAT ACTTTCGTCA
TCTATTCGTA TAATTCCTGA GTACCAAAGG GCTGTTAAAT TTAGACTAGG CCGTGTCGTA
GGCGTAGTTG GCCCAGGGCT TGTGTTTATA ATTCCGATAA TCGATACTAT AATGAGATAT
GACCTACGTG TTGAGGTAGT AGACGTGCCC GCACAACGCG CGTTGACTAA GGATAATGTC
GAAGTAACTA TAGACGCAGC AATATACCTT AGAGTAGTTG ACCCGTTGAA AACTGCTTTA
ACTGTAAGAA ACCATATACC AGCTGTTGCA ATATATGCAG CGTCTACTCT CCGCGATGTT
GTTGGCATGG TGGATCTCGA CACTTTACTC ACACATAGAG ACGAAATTGC GAAAAAGATC
GCATCAATAG TAGACGAACA TGTAACTCCA TGGGGTGTAA AAGTAACCGC AGTTGCTATC
AAAGATATAA AGCTTCCTGA TGTATTACTC CGCGCAATGG CCAGTCAAGC AGAGGCAGAG
AGAGTTAGAC GTGCTAAAAT TACGCTGGCT TCTGCTGAAT ATGAAGCGAG TAAGATCTAC
CTCGAGGCCG CCGAGCGCTA TTCTCAGAAT CCCACTGCTG TTCAACTAAG AATGATAGAC
GCATTGATTG AAATAGCTAG AGAACATAAC TTAATCATTG TCACGCCGCC CACTCTGGAG
TACGTAGCTC TGCCCTTGGC TGTTACCAAG AGAGAAAAGA AGGAATGA
|
|---|
| Protein sequence | MSINLFTYAV TIVVLQIAEQ IIFAVLLLLA LIILVTILSS SIRIIPEYQR AVKFRLGRVV
GVVGPGLVFI IPIIDTIMRY DLRVEVVDVP AQRALTKDNV EVTIDAAIYL RVVDPLKTAL
TVRNHIPAVA IYAASTLRDV VGMVDLDTLL THRDEIAKKI ASIVDEHVTP WGVKVTAVAI
KDIKLPDVLL RAMASQAEAE RVRRAKITLA SAEYEASKIY LEAAERYSQN PTAVQLRMID
ALIEIAREHN LIIVTPPTLE YVALPLAVTK REKKE
|
|---|
| |