Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1046 |
Symbol | |
ID | 4617681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 943152 |
End bp | 943673 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639784142 |
Product | transposase, IS605 OrfB |
Protein accession | YP_930562 |
Protein GI | 119872555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0261063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTATTCT ACAGGTCGGT TCCACTCGAC GTCCAACTGA GAGTGGAAAA CGAGAGAGAT GTGGACAAGG CCGTCTTTGT TGACCTAAGG AGTGGCGCCA AAGACGTCGC GGGCAAGATA ATTGAACTCG CCAGGGCATA CAACGCCGGT CGTGGTAGAC ACAATGGGAG ATACAAGTTA CCGAGAGCTC AAGGCGGGAG TGGAGTACTG AGGAGGAGGT TGAAGGAGTC GGCGCAGTGG TACGGCATTC CGTATCTAGA GGAGCGGCTG TATTCAACAG TCTGTCCAAA GCGCGACGCA AAGGTGGTAG AGGAGAGGGG TCGCGTAATG CATTGCCCCA CCTGCGGCTT CAGAGCGCAC CGCGACAACG CCCCCATGAC ATGGCGGAGA AGAGGTACTG GGGGCTACTC CAGAAACAAC CCCCTCGGCG ACCACCACCT AACCCCCCAA CTACACCTCC CACATGAACA ACGCCGGCCC CAGGCGGCAG ACAAAGAAAA TCGACGACCT ACGGCCACAT AA
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Protein sequence | MVFYRSVPLD VQLRVENERD VDKAVFVDLR SGAKDVAGKI IELARAYNAG RGRHNGRYKL PRAQGGSGVL RRRLKESAQW YGIPYLEERL YSTVCPKRDA KVVEERGRVM HCPTCGFRAH RDNAPMTWRR RGTGGYSRNN PLGDHHLTPQ LHLPHEQRRP QAADKENRRP TAT
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