Gene Pisl_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1046 
Symbol 
ID4617681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp943152 
End bp943673 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID639784142 
Producttransposase, IS605 OrfB 
Protein accessionYP_930562 
Protein GI119872555 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0261063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATTCT ACAGGTCGGT TCCACTCGAC GTCCAACTGA GAGTGGAAAA CGAGAGAGAT 
GTGGACAAGG CCGTCTTTGT TGACCTAAGG AGTGGCGCCA AAGACGTCGC GGGCAAGATA
ATTGAACTCG CCAGGGCATA CAACGCCGGT CGTGGTAGAC ACAATGGGAG ATACAAGTTA
CCGAGAGCTC AAGGCGGGAG TGGAGTACTG AGGAGGAGGT TGAAGGAGTC GGCGCAGTGG
TACGGCATTC CGTATCTAGA GGAGCGGCTG TATTCAACAG TCTGTCCAAA GCGCGACGCA
AAGGTGGTAG AGGAGAGGGG TCGCGTAATG CATTGCCCCA CCTGCGGCTT CAGAGCGCAC
CGCGACAACG CCCCCATGAC ATGGCGGAGA AGAGGTACTG GGGGCTACTC CAGAAACAAC
CCCCTCGGCG ACCACCACCT AACCCCCCAA CTACACCTCC CACATGAACA ACGCCGGCCC
CAGGCGGCAG ACAAAGAAAA TCGACGACCT ACGGCCACAT AA
 
Protein sequence
MVFYRSVPLD VQLRVENERD VDKAVFVDLR SGAKDVAGKI IELARAYNAG RGRHNGRYKL 
PRAQGGSGVL RRRLKESAQW YGIPYLEERL YSTVCPKRDA KVVEERGRVM HCPTCGFRAH
RDNAPMTWRR RGTGGYSRNN PLGDHHLTPQ LHLPHEQRRP QAADKENRRP TAT