Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1041 |
Symbol | |
ID | 4617148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 939452 |
End bp | 940072 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639784138 |
Product | hypothetical protein |
Protein accession | YP_930558 |
Protein GI | 119872551 |
COG category | [R] General function prediction only |
COG ID | [COG1634] Uncharacterized Rossmann fold enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.775077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000191515 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTGCA AACCGACGAT TTTTGACCCA GCTGAATGGG CGTATGTAAT AACTTTGGCA AAGGCGTTGC TACCCGAGCT TTCTTTTCAT AGAGACAACA CAGCCACTGA GATTGCGAGC AGACTAAACG GCATATCTAT CGAAGTTTTA AGAGACTTCA ATTGGGAAGC GCCAGTTATA TATATGCCTC CCTTTGAGAT TTTGGCCGAA GGCACTGTCA CTATAGCAGT AGAGGGCTAT ACCGCTAAAA AATTACTTAG GCGTAATATA AAGGCAGACG TAGTTGTCAG CGACCTCGAT TTTGAGCCAG ATGGAGTAGA GCTTGGAAAG ACGCAGGTAG TGCATGTACA TGGCGATAAC TATTGGCGTA TTCCAAACAG AAGGTGGGTC TATACAGTAC AGACGTGGCC CATTGGCTGT ACATTTAACA TCTCTGGCTT TACTGACGGA GATAGAGCTG CTTATCTCGC ATATTATATG GGCGCGAGAG AGTTAACGAT TTCCGGCTTT TATCCGCATA TTGTTATAAA GAGGAGCAAT GATATCAAGA GGAGAAAGCT GGCTGTCGCA ACACACCTAC TATACAGACT CTCTCTCAGA ATCCCCATAC ACTTTCTCTA G
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Protein sequence | MSCKPTIFDP AEWAYVITLA KALLPELSFH RDNTATEIAS RLNGISIEVL RDFNWEAPVI YMPPFEILAE GTVTIAVEGY TAKKLLRRNI KADVVVSDLD FEPDGVELGK TQVVHVHGDN YWRIPNRRWV YTVQTWPIGC TFNISGFTDG DRAAYLAYYM GARELTISGF YPHIVIKRSN DIKRRKLAVA THLLYRLSLR IPIHFL
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