| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1026 |
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| Symbol | sucC |
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| ID | 4616320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 925430 |
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| End bp | 926578 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639784123 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_930543 |
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| Protein GI | 119872536 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000227763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 8.1657e-23 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAACTAC ATGAATATGA GGCTAAAGAG CTCTTCCTAA GATATGGAGT TAAAATACCC
CCTGGCAAAT TAGCCCTAAC TCCAGATGAG GTACGCAAAA TCGCAGAGGA AATAGGCACG
CCTGTAGTTT TAAAGGCACA GGTAGTTGTA GCAGGCAGGG GTAAGGCAGG CGGTATAAAG
ATAGCTCAGA CCCCAGAGGA GGCATATGAA CTTTCAAAAA AGATGTTTGG CATGAACATA
AAGGGGCTTG TAGTGAGGAA GCTTTATGTG ACTAAATACG TAGAGGTCGA ACGGGAGATG
TACCTTTCGC TTATCATCGA TAGAGCTTCT CGTAGATATC TATTCCTAGC CTCTCCAATA
GGTGGGGTAG ACATCGAGGA AATAGCCAAA ACAAGCCCAG AAAAGATTAA GAAGGTATAT
GTGGATCCCT CTATTGGTTT AAGAGACTAT CACATTAGGT CTATAATATC ATGGCTCGGC
TTTAAACCTG GGTCGCAACA GTGGCAACAA ACCGCTTCAG TTATACAAGC AATGTATAGA
ATAATGGTAG ATTATGACGC TGAGCTAGTT GAGACGAACC CGCTTGCGTT ATCAAAAGAG
GGCGAGGTAA TACCCCTTGA TGCAAGGGTG ATAGTTGACG ACAACGCTCT CTTTAAACAC
CCAGATCTTG AGAAGGCGTT GGAAGAGGAT CCACGTGATA TAACAGAATT TGAGGCGTAT
GCAAAAAAGA TAGGATTTCA CTATGTGGAA TTAGATGGAG ATATTGGAAT TATTGGAAAC
GGCGCTGGTT TGACCATGGC GACAATGGAT CTCGTATATC ACTTCGGCGG TAGACCTGCG
AACTTTCTCG ATATAGGCGG TGGCGCAAGT AGAGAAGTTG TTAAGGAGGC CGTCAAAGTA
TTGCTTAACC ATCCCAGGGT CAAAGTTATA TTTGTCAACA TATTTGGAGG AATAACGCGT
GCAGATGAGG TAGCGCTGGG CATAAAAGAT GCGCTTGCAG AGGTTAAAGA ACATACAAAG
AAAATTGTAG TGAGAATAAA GGGCACAAAT GAGGAACAGG GCAAGGCAAT ACTCTCAGAA
ATTGGAATAC CGTTGTTTGA AAACGCAGAG GAGGCGGCAA AAAAAGCTGT AGAATTGGCG
AAGATATGA
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| Protein sequence | MKLHEYEAKE LFLRYGVKIP PGKLALTPDE VRKIAEEIGT PVVLKAQVVV AGRGKAGGIK
IAQTPEEAYE LSKKMFGMNI KGLVVRKLYV TKYVEVEREM YLSLIIDRAS RRYLFLASPI
GGVDIEEIAK TSPEKIKKVY VDPSIGLRDY HIRSIISWLG FKPGSQQWQQ TASVIQAMYR
IMVDYDAELV ETNPLALSKE GEVIPLDARV IVDDNALFKH PDLEKALEED PRDITEFEAY
AKKIGFHYVE LDGDIGIIGN GAGLTMATMD LVYHFGGRPA NFLDIGGGAS REVVKEAVKV
LLNHPRVKVI FVNIFGGITR ADEVALGIKD ALAEVKEHTK KIVVRIKGTN EEQGKAILSE
IGIPLFENAE EAAKKAVELA KI
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