| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1022 |
|---|
| Symbol | |
|---|
| ID | 4618058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 922740 |
|---|
| End bp | 923234 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639784119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_930539 |
|---|
| Protein GI | 119872532 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1839] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0698369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 5.83418e-20 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCA AATTCGATGT TATTGACGTG CCTATTCCCC AGGGGGCTAA TGTTATTATC
GGCCAGGCCC ACTTCATAAA AACGGTAGAG GACCTCTACG AAGTACTTGT AACGTCAGTA
CCTGGAGCTA AATTTGCCAT AGCTTTTTGC GAGGCCTCTG GTAAGAGGCT TATTAGACAT
GAGGCAAACG ACGAGGAACT CAGAAACTTA GCGATTGAAG TGTGTAAAAA AATAGCCGCT
GGGCACGTCT TTGTTATATA TTTACGCAAC GCTTGGCCCA TTAACGTCCT AAATGCTATA
AAAAATGTGC AAGAGGTAGT ACGGATCTTT GCCGCCACCG CGAACCCGCT AAAAGTGATA
GTCGCAGAGG TAGAGCCAGA GAGACGCGGC GTAGTTGGAG TTGTTGATGG CCACTCGCCG
CTTGGCGTAG AGACGGAGAA AGATAGGGAG GAAAGGAAAA AATTCCTAAG AGACGTAGTT
AAGTATAAGC TTTGA
|
|---|
| Protein sequence | MSVKFDVIDV PIPQGANVII GQAHFIKTVE DLYEVLVTSV PGAKFAIAFC EASGKRLIRH
EANDEELRNL AIEVCKKIAA GHVFVIYLRN AWPINVLNAI KNVQEVVRIF AATANPLKVI
VAEVEPERRG VVGVVDGHSP LGVETEKDRE ERKKFLRDVV KYKL
|
|---|
| |