| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1020 |
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| Symbol | |
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| ID | 4617554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 919430 |
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| End bp | 921664 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639784117 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_930537 |
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| Protein GI | 119872530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 1.28402e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTTTTC TCGAACAAAT ATTAAGCGAC TCTGGTAGAG AGGTTGTTTA TATAAAGACA
GATGAAGCTG AGGTCGTTGA AAAGTGTTGT AGTGTACACC AAGTGCTTAT GCCAGTTGTT
GCAAAAGTCT TTGAAGCTGT TGGAATTTCC CATCTATATA GGTATCAATA TGACGCTATT
CAAAGCATTA GGAGTAATAG AGATACCGTA ATTGTTGCTG GAACAGGTAT GGGTAAGACC
GAGGCTTTTT TAGCTCCGCT TTTTGAGACG TCTCTAGAGT CGCTAGGAGG ACCGGTGGCG
CTTGTGCTAT ATCCCACTAA GGCGTTGGCT CGGGATCAGT TTGCCAGATT TAGAAAATTT
GCAGACAAGC TTGGAGTAAG AGTCATGGTG TATGACGGTG ACACTCCGCA AAGAGAGAGA
CGAATTCTAT ATGAAATGCC GCCGCATATA ATAATTAGCA ATCCCGACAT GGTCAGCCTT
GCCCTTATGC ACGTGGCAAA ATTTAGAGAG CTTGTAAAAC GATTGAAATA CGTTGTCTTA
GATGATTTCC ACGTCTATAG CGGCGTTTTT GGCTCGCATA TGTATTACCT CCTGAGACGG
CTTAAGCGAT TTACAAGACC TGTTTTTATT GCGACGAGCG CCACTGTAGG AAACCCGGCG
GAATTTGCCC AAGCCCTCTT TGATAGTAAT AAAATAAACG TCGTTTGGGG ACCGTTGGGC
AGGAGGGGAC GGTTAATACA AGTACTTGTA AGGCCGAAGT TTAGATCTAA GTGGGCTGAG
GCTGCTCGCC TTTCTTCCCT ATGTATAGAA AACGGGCTTA AGTGTATTGT CTTTACAGAT
AGCCATAGAT ATAGCGAGAT TATATACAGA GCTTTAAAGA TGGGGGGCTA TGGAGATAAA
GTAGCAGTTC ATAGAGCAGG TCTCGAGCCC GAGGAGAGAA AAAATGTAGA GGAGGCGTTT
AAGAGAGGCG ATGTAAATGT AGTTATTTCA ACGCCGACGT TAGAACTAGG TATAGATATA
GGCGATATAG ACGCGGCAAT ATTAGCATCA ATACCGCCTT CTTACAATAG ATATCTTCAG
CGCATTGGCA GAGTGGGAAG ACGGGGTCAA ACTGGCTATG TGGTGCAAAT ATTGGGGAAC
GACCCTATTT CTCAATACTA TCGTAACTAC CCACACGAAT TTTTTTCGAG ATCGCTTGAA
CCGCTTGGAT TTGAAAAAGA GAATGAAGAC ATAGCGTCGC TCCATTTATT AGCTGCTGCA
ACAGACATGC CGTTGAAAAT GGGGGAACTC ACACCATTTG AACAGGAGCT GGCGGAAAAC
CTACTAAAAA GAGGTCGACT CAAAAGGGTG GGTAATTTTT TGAGAATCAC AAAAGAGGGA
CGGGAGATGC TTTCATCCCT TAGTCTTAGA GGGTCGCCTC ATGTGGTTAA GATAAAGACG
GTAGATGGAA GCGTAATAGG CGAGAGGGAG CTCCCATTAG CGCTTTATGA GTTACATCCA
GAGGCTATAT ATATGCATGG GGGAAGGACA TATGTATCCG AGTTGCTTGA TTTGACACGT
CGCATTGCTG TAGTTAAGCC TGTAGATGCA GAAGACTTAG TGACTCAGGC ATTGGAAGAT
ATGGAGCCGG AAATTATAGA GGTATATGAA GAGGGGATAA CGGAGGGCGT GCCTTATCAA
TTTGGTCGTC TAAGAATAAA GATAACGGTA TATGGGTATG CTCTCAAACG TTTTACCACA
GAGGAGACTC TTGGAGAGTA TAACATAGAG CCGCTCTCCT ATGAGTTTGA GACAAAGGGT
GTCGTTTTTT ATATGCCGTA TATACGCTTT AGTACAAATG ACACAATTGA CTGGGAGGCA
AGAACTAAGG GTTATCACGC CACAGAACAT GTGTTAATAT CTGCGACGGA GATCGCAATA
GGCGCCTCTA AGACCGACCT GGGCGGCATT AGTTATCCAG ATGGCGTAAT TGTAATATAC
GATTCGCATA TAGGCGGCAA TGGCACTGCA CGTCTCCTAT TGAAAAACTT CAGAAGAGTA
GCCGAGATAG CGCTCAAGAT AGTAAAGGGT TGCGACTGTG TAGACGGTTG CCCTAAATGT
GTCTATTCGC CATATTGTGG AAACAACAAT AAGATGTTGT CACGGAGAAA CGCCATCAAG
GTTCTAGAAG CGGTGCTTAA CAAGTCGGGG ACGCCCGCGG TGAGGGAGAT CCCAAAGGCG
GGGGCCCTAG CCTAG
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| Protein sequence | MSFLEQILSD SGREVVYIKT DEAEVVEKCC SVHQVLMPVV AKVFEAVGIS HLYRYQYDAI
QSIRSNRDTV IVAGTGMGKT EAFLAPLFET SLESLGGPVA LVLYPTKALA RDQFARFRKF
ADKLGVRVMV YDGDTPQRER RILYEMPPHI IISNPDMVSL ALMHVAKFRE LVKRLKYVVL
DDFHVYSGVF GSHMYYLLRR LKRFTRPVFI ATSATVGNPA EFAQALFDSN KINVVWGPLG
RRGRLIQVLV RPKFRSKWAE AARLSSLCIE NGLKCIVFTD SHRYSEIIYR ALKMGGYGDK
VAVHRAGLEP EERKNVEEAF KRGDVNVVIS TPTLELGIDI GDIDAAILAS IPPSYNRYLQ
RIGRVGRRGQ TGYVVQILGN DPISQYYRNY PHEFFSRSLE PLGFEKENED IASLHLLAAA
TDMPLKMGEL TPFEQELAEN LLKRGRLKRV GNFLRITKEG REMLSSLSLR GSPHVVKIKT
VDGSVIGERE LPLALYELHP EAIYMHGGRT YVSELLDLTR RIAVVKPVDA EDLVTQALED
MEPEIIEVYE EGITEGVPYQ FGRLRIKITV YGYALKRFTT EETLGEYNIE PLSYEFETKG
VVFYMPYIRF STNDTIDWEA RTKGYHATEH VLISATEIAI GASKTDLGGI SYPDGVIVIY
DSHIGGNGTA RLLLKNFRRV AEIALKIVKG CDCVDGCPKC VYSPYCGNNN KMLSRRNAIK
VLEAVLNKSG TPAVREIPKA GALA
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