Gene Pisl_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1004 
Symbol 
ID4618115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp902883 
End bp903131 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content40% 
IMG OID639784101 
Producthypothetical protein 
Protein accessionYP_930521 
Protein GI119872514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.66388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000181623 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTATT TACGACTATC TGTGCCCTAT TGTGCAGTAT GTGGGAGAGA GGTCAATTTT 
AAGAACGTCG CGTACATACG TGAAAACATA TTTGTATGTA AGGACTGTTT TCCGCAGTAC
TATATAAAGA ACTTATGTAG AGTTGTCGAG CGTAGGTTAA GAGGCGAGAA CCCCCTTGCG
TGCAATTTTT GTACATTTAA GAAGCAGTGC GACAACTATG TTGCCAAAAC TGTAAAATCG
CTTTCATAG
 
Protein sequence
MRYLRLSVPY CAVCGREVNF KNVAYIRENI FVCKDCFPQY YIKNLCRVVE RRLRGENPLA 
CNFCTFKKQC DNYVAKTVKS LS