Gene Pisl_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0994 
Symbol 
ID4616816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp894114 
End bp894773 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID639784092 
Producthypothetical protein 
Protein accessionYP_930512 
Protein GI119872505 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.811741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0118978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTAGAT TTTTCATCTC CAAGGGCCCT CTGGATTTAT CCGCTGCGTT GAAACTCGCC 
GCCAAATATG ACCCCTATAA ACAAGACGAG AAAAAACAAC ACGGAGATGG CTGGGGCTTT
GTGGCGGCAT CTGCCACCGA CTTTATACAT TATAAATCGG GGCGTCCGGC GTGGGAGGAC
CCCGTTGTAG TGCCTATGAA AGAGGCTGTC TTGGCGCATG TAAGAGCGGC CTCTCTTGGC
GAGCCCAAAG GCCCAGCTCA TGCGCATCCA TATCTTGTAT ATACGCCAGA TGGTCGCATC
CTCTTCGTGG CTCACAACGG CTCGGTGGAT AAAAACGCTA TGGCAGCTGA AATAAGCGTT
GACCCATCTC TTTATACCGA CAGCTATATC CTAGCGCTAT TTATCGCAAG GCGGTGGCAT
TTGCCGCAGA GAGCTTTTGA AGAGGCTCTC CTCTACGCGA AGACGGCTCT TAACGTAGCA
GTGCTTGAGT TTCCCAGTCT TAAGGCTCAT GTATATACTT TTTACAAAGG CTCTAGGGAG
TACTATGCGC TCTATTTAAT AGAGACAAAG GATGCCAAAG CAGTTGTTTC ATCTACATTG
ATGAGACATA TAGATCTGCC AGGGAGAGAG TTAGAAAACG GCACCTATTT AGTCTTCTAA
 
Protein sequence
MCRFFISKGP LDLSAALKLA AKYDPYKQDE KKQHGDGWGF VAASATDFIH YKSGRPAWED 
PVVVPMKEAV LAHVRAASLG EPKGPAHAHP YLVYTPDGRI LFVAHNGSVD KNAMAAEISV
DPSLYTDSYI LALFIARRWH LPQRAFEEAL LYAKTALNVA VLEFPSLKAH VYTFYKGSRE
YYALYLIETK DAKAVVSSTL MRHIDLPGRE LENGTYLVF