Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0994 |
Symbol | |
ID | 4616816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 894114 |
End bp | 894773 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639784092 |
Product | hypothetical protein |
Protein accession | YP_930512 |
Protein GI | 119872505 |
COG category | [R] General function prediction only |
COG ID | [COG0121] Predicted glutamine amidotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.811741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0118978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGTAGAT TTTTCATCTC CAAGGGCCCT CTGGATTTAT CCGCTGCGTT GAAACTCGCC GCCAAATATG ACCCCTATAA ACAAGACGAG AAAAAACAAC ACGGAGATGG CTGGGGCTTT GTGGCGGCAT CTGCCACCGA CTTTATACAT TATAAATCGG GGCGTCCGGC GTGGGAGGAC CCCGTTGTAG TGCCTATGAA AGAGGCTGTC TTGGCGCATG TAAGAGCGGC CTCTCTTGGC GAGCCCAAAG GCCCAGCTCA TGCGCATCCA TATCTTGTAT ATACGCCAGA TGGTCGCATC CTCTTCGTGG CTCACAACGG CTCGGTGGAT AAAAACGCTA TGGCAGCTGA AATAAGCGTT GACCCATCTC TTTATACCGA CAGCTATATC CTAGCGCTAT TTATCGCAAG GCGGTGGCAT TTGCCGCAGA GAGCTTTTGA AGAGGCTCTC CTCTACGCGA AGACGGCTCT TAACGTAGCA GTGCTTGAGT TTCCCAGTCT TAAGGCTCAT GTATATACTT TTTACAAAGG CTCTAGGGAG TACTATGCGC TCTATTTAAT AGAGACAAAG GATGCCAAAG CAGTTGTTTC ATCTACATTG ATGAGACATA TAGATCTGCC AGGGAGAGAG TTAGAAAACG GCACCTATTT AGTCTTCTAA
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Protein sequence | MCRFFISKGP LDLSAALKLA AKYDPYKQDE KKQHGDGWGF VAASATDFIH YKSGRPAWED PVVVPMKEAV LAHVRAASLG EPKGPAHAHP YLVYTPDGRI LFVAHNGSVD KNAMAAEISV DPSLYTDSYI LALFIARRWH LPQRAFEEAL LYAKTALNVA VLEFPSLKAH VYTFYKGSRE YYALYLIETK DAKAVVSSTL MRHIDLPGRE LENGTYLVF
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