| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0979 |
|---|
| Symbol | |
|---|
| ID | 4617503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 876939 |
|---|
| End bp | 877886 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639784078 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_930498 |
|---|
| Protein GI | 119872491 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.607757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAAAT TTTTTTATTC AGCGCTGAAA CAAGTATATG TGCGTCTATT TCTTGGAATA
GATATAGGAG CTACTTGGAC TAGGGCTTTA TTAATAGACG AACATGGTGA TATAATAAAT
AGAGTTAAAG TTAAAACTAG TGTAAATCCT ATTGCTGATG TTGTTGATAT AGTAAAGCGA
TGGCAATTTC ACGCCGTGGG AGTAGGGTCT ATAGGGCCGC TGGATCTTAA GAGCGGGTGG
GTTGTAAATT CGCCAAACTC CCCAACGCGT AGATTTCCAC TGGTGGAACC TTTAAAAGAG
CTTGGAAAAC CTATAGTAGT TGCCAACGAT TGTGTAGCAG CTGTATGGGG CGAATACGTG
TTTAAGTATA ATGTTGAAAA TATGGTTTAT ATAACGCTAT CTACTGGAGT TGGCGTAGGC
GCTATAGTAA ATGGTAATTT GCTATTGGGC AAAGATGGTA ATGCCCATGA GCTTGGACAT
GCGGTTATAG ACTTTAAATC GGCGAGGAGA TGCGGCTGTG GGGGGCGTGG CCATTTTGAA
GCTTATGTGG GCGGCGCGCA TATACCTAGG GTTTATCAAG AGGCTACTGG CGACGCTCCG
GCAAGCCCAG AGGAAATATT TAGAAGGTAT AGACATGGCG ACGAAAAAGC CAGAAAGTTT
ATAAATCTAT GGCTAGACGC GTTAGCCGCC GGAATTGCTA CTGTCGTAGC TGCCTACGAC
CCCGAATTGC TCATAGTAGG GGGCTCTATA GCGTTGAACA ATTGGGACAT AATATCGCGT
GAACTCCCCG CTAGGCTAAG GGATTATCTA AGCCTACGAG AGCCAGAAAT TTTAAAGGCC
TCTTTTGGAG ATGATGAAGT AGCTGTAGGT GCAGCTGCTT TAGCCTATAA AACACCTGAT
ACTTTAAAGA AGTTCGGATA CCCCATTACG GCCTCTTCCC AGTCTTAG
|
|---|
| Protein sequence | MGKFFYSALK QVYVRLFLGI DIGATWTRAL LIDEHGDIIN RVKVKTSVNP IADVVDIVKR
WQFHAVGVGS IGPLDLKSGW VVNSPNSPTR RFPLVEPLKE LGKPIVVAND CVAAVWGEYV
FKYNVENMVY ITLSTGVGVG AIVNGNLLLG KDGNAHELGH AVIDFKSARR CGCGGRGHFE
AYVGGAHIPR VYQEATGDAP ASPEEIFRRY RHGDEKARKF INLWLDALAA GIATVVAAYD
PELLIVGGSI ALNNWDIISR ELPARLRDYL SLREPEILKA SFGDDEVAVG AAALAYKTPD
TLKKFGYPIT ASSQS
|
|---|
| |