Gene Pisl_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0966 
Symbol 
ID4616596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp860611 
End bp861402 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID639784065 
Producthypothetical protein 
Protein accessionYP_930485 
Protein GI119872478 
COG category[S] Function unknown 
COG ID[COG2106] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.477244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTT CAATAGCAGT ACCCCACGAC TTTCTTTCAG AAGCCCCCGA CGAGGCTAGC 
AAAGTGCGCA AACTAGGTTA CTTAGCTAGA GCTGCGGCTA TATTTAACGT TGAGACAATA
ATAATATATT ACTACGGTAG TCCACTTAGG GAAGAGATCG ATTTCGCCAA AACAATCCTA
GAATATGTCG TAACACCACC ATATCTTAGG AAGAGACTTT TTAAACTAGA TCAACGGCTT
AAGTTGGCAG GACTTCTCCC CCCTTTGAAG ATACCGAGCC ATACCGTGTC TCTTGAGCCA
AGAGTTGGCG AAATACGCGA AGGTGTGGTC GAGCGATGGG ACGGTTACTT TTCGCTGGTG
TATATAGGCG GTGGGAAGTA TGCAAAAATT CCAAAGCCTT ATCCGGTGGG CTCACGTCTC
CTGGTAAAAA TAGAGGCGCC AACGGAAAGA CCTGATACCT ATAGAGCCTC TGTGTATAGA
GGCACCCCTC CTGCGTATTG GGGCTACAAA GTTGAGGTAA GGCCTTTACA GAGTTTAACC
GAGGGATTTG ATGCCATAAT TTTGACAGGA AAGGAGGGGA GGTCTGTATG TGAAGCTAAG
CCAAAGGTAG GGAAGAAGAC GTTGGTTGTA TTCGGAGGCC CGAGAAAGGG GGTTGATGAG
ATATACAAAG AAGCTGGCAT TGAACCGCCT GGCGAGCTTA TAAATTTCGT CCCACGTCAA
GGCGTTGAAA GTATTAGAAC AGAAGAGGCA GTTTTTATCG TCCTCTCAAT TCTTAACTTG
TCAAAGTGCT AA
 
Protein sequence
MSFSIAVPHD FLSEAPDEAS KVRKLGYLAR AAAIFNVETI IIYYYGSPLR EEIDFAKTIL 
EYVVTPPYLR KRLFKLDQRL KLAGLLPPLK IPSHTVSLEP RVGEIREGVV ERWDGYFSLV
YIGGGKYAKI PKPYPVGSRL LVKIEAPTER PDTYRASVYR GTPPAYWGYK VEVRPLQSLT
EGFDAIILTG KEGRSVCEAK PKVGKKTLVV FGGPRKGVDE IYKEAGIEPP GELINFVPRQ
GVESIRTEEA VFIVLSILNL SKC