Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0961 |
Symbol | |
ID | 4616358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 854981 |
End bp | 857338 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639784059 |
Product | DNA polymerase II |
Protein accession | YP_930480 |
Protein GI | 119872473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTAA AAGTTTGGCC TCTCGACATT ACATATGCCG TAGTTGGTAG TGTTCCTGAG ATTAGGATTT TCGGTATTTT AAGCAGCGGT GAGCGTGTTG TACTTATCGA TAGATCTTTT AAGCCGTATT TCTACGTCGA TTGTGCCGTT TGTGAACCAG CTGCTCTAAA GACTGCGTTG TCGCGAGTTG CGCCAATAGA CGATGTACAA ATAGTTGAAA GGAGGTTCCT CGGAAGGTCT AAGAAGTTTT TGAAAGTTAT TGCTAAAATT CCTGAGGATG TCAGGAAACT TAGAGAAGCC GCAATGTCGA TACCAAGGGT TTCTGGCGTT TATGAAGCAG ATATTCGTTT TTACATGCGA TATATGATAG ACATGGGGGT AGTGCCCTGT AGTTGGAATG TGGCAGAGGT AGAAGAGGGG GGTAGACTTG GCGGGATTCC CACATACGTT GTCTCTCAGT GGTACGGGAT TGACGAAGGC TTTCCCCCTT CATTGAAAGT TATGGCGTTT GATATCGAGG TTTATAACGA GCGCGGCTCT CCCGATCCTA TCAGAGATCC CGTGGTTATG TTAGCCATAA AGACAAACGA TGGGCACGAG GAGGTTTTTG AAGCTAGTGG GAAAGACGAT AGGGGGGTTG TGCGCGCTTT TGTGGATTTT ATCAGAAGTT ATGACCCCGA TGTAATTGTT GGCTATAATT CCAACGGCTT TGATTGGCCT TATTTAGTAG AGCGTGCGAA AGCCGTCGGC GTGCCGCTCA AGGTTGATAG ACTGAGCAAT CCCCCTCAAC AGAGCGTGTA TGGACACTGG TCTATCGTTG GTAGAGCAAA TGTAGATCTC TATAACATCG TGGAAGAGTT CCCGGAGATT AAGCTAAAGA CTCTTGACCG TGTTGCTGAA TATTTTGGTG TAATGAAAAG AGAAGAGAGG GTGTTGATCC CAGGCCACAA GATTTATGAA TACTGGAAAG ACCCCAATAA AAGACCTCTA CTTAAGCGGT ATGTTCTAGA CGACGTACGA TCCACTCTAG GACTTGCCGA CAAGCTCCTA CCGTTTTTAA TACAACTGTC TTCTGTATCT GGGCTACCGC TGGATCAGGT GGCAGCGGCG AGCGTGGGCA ACAGGGTAGA GTGGATGCTT CTTAGGTACG CGTACCGCCT GGGCGAGGTA GCTCCGAACA GAGAGGAGAG GGAGTACGAA CCATATAAGG GGGCCATCGT GCTTGAGCCA AAGCCCGGGA TGTACGAAGA CGTGCTTGTA CTTGACTTCT CTTCCATGTA CCCTAACATC ATGATGAAGT ACAACCTATC GCCGGATACG TACCTAGAGC CCGGCGAGCC GGATCCGCCC GAGGGTGTAA ACGTGGCCCC CGAGGTGGGG CATAGGTTTA GGAGAAGCCC ACCAGGCTTC GTCCCTCAGG TGTTGAAGAG CTTGGTGGAG CTTAGAAAGG CGGTAAGAGA GGAGGCGAAG AAATACCCCC CAGATTCGCC AGAGTTTAAG ATCTTAGACG AGAGACAACG TGCCCTCAAG GTTATGGCCA ATGCCATTTA TGGATACTTG GGCTGGGTGG GGGCCCGGTG GTATAAGCGG GAGGTAGCCG AGTCTGTGAC GGCTTTTGCC AGAGCGATTC TAAAAGACGT TATTGAACAA GCTAGAAGGT TGGGCATTGT GGTTGTATAT GGCGATACAG ACAGCCTATT TGTCAAAAAA CATGGAGACG TGGACAAACT GATCAAGTAC GTGGAGGAGA AGTACGGCAT AGACATAAAG GTGGACAAGG ATTACGCCAA GGTGCTTTTC ACGGAGGCTA AGAAGAGGTA CGCTGGCTTA TTGAGAGATG GGCGTATAGA TATTGTGGGA TTCGAGGTCG TGAGGGGAGA CTGGAGTGAA CTTGCCAAAG ACGTTCAGCT AAGAGTTATA GAGATTATAC TTAAGTCAAG AGATATTGTG GAAGCTAGAC ATGGCGTTAT AAAATATATT AGAGAAATAA TAGAACGACT GAAAAATTAC AAGTTTAACA TTGATGATTT AATAATATGG AAAACTCTAG ACAAAGAGTT AGACGAATAT AAGGCGTATC CGCCTCATGT TCACGCTGCG CAAATTCTCA AGAGACACGG CTATCGAGTG GGCAAAGGCA CTACGATAGG CTATGTCATA GTTAAAGGAG GCGAAAAAGT ATCTGAGAGG GCGTTGCCGT ATATACTCCT TGACGATATA AAAAAGATAG ATATCGACTA CTACATAGAG AGACAGATAA TACCAGCGGC GTTGAGAATA GCAGAGGTTA TAGGGGTGAA AGAGTCGGAT CTTAAAACGG GGAGAATGGA AAGGTCGCTT CTTGATTTTC TAAGTTAG
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Protein sequence | MELKVWPLDI TYAVVGSVPE IRIFGILSSG ERVVLIDRSF KPYFYVDCAV CEPAALKTAL SRVAPIDDVQ IVERRFLGRS KKFLKVIAKI PEDVRKLREA AMSIPRVSGV YEADIRFYMR YMIDMGVVPC SWNVAEVEEG GRLGGIPTYV VSQWYGIDEG FPPSLKVMAF DIEVYNERGS PDPIRDPVVM LAIKTNDGHE EVFEASGKDD RGVVRAFVDF IRSYDPDVIV GYNSNGFDWP YLVERAKAVG VPLKVDRLSN PPQQSVYGHW SIVGRANVDL YNIVEEFPEI KLKTLDRVAE YFGVMKREER VLIPGHKIYE YWKDPNKRPL LKRYVLDDVR STLGLADKLL PFLIQLSSVS GLPLDQVAAA SVGNRVEWML LRYAYRLGEV APNREEREYE PYKGAIVLEP KPGMYEDVLV LDFSSMYPNI MMKYNLSPDT YLEPGEPDPP EGVNVAPEVG HRFRRSPPGF VPQVLKSLVE LRKAVREEAK KYPPDSPEFK ILDERQRALK VMANAIYGYL GWVGARWYKR EVAESVTAFA RAILKDVIEQ ARRLGIVVVY GDTDSLFVKK HGDVDKLIKY VEEKYGIDIK VDKDYAKVLF TEAKKRYAGL LRDGRIDIVG FEVVRGDWSE LAKDVQLRVI EIILKSRDIV EARHGVIKYI REIIERLKNY KFNIDDLIIW KTLDKELDEY KAYPPHVHAA QILKRHGYRV GKGTTIGYVI VKGGEKVSER ALPYILLDDI KKIDIDYYIE RQIIPAALRI AEVIGVKESD LKTGRMERSL LDFLS
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