Gene Pisl_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0958 
Symbol 
ID4618132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp851089 
End bp852753 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content45% 
IMG OID639784056 
Productthermosome 
Protein accessionYP_930477 
Protein GI119872470 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02339] thermosome, various subunits, archaeal 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.301353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CTGTATTGAC TCAAATAGGA GGAGTGCCAG TGCTTGTATT AAAGGAAGGT 
ACGCAGAGGG CTTTTGGCAA AGAGGCGCTT AGGCTAAATA TAATGATTGC AAGAGCTATA
GCCGAAGTTA TGAGGACGAC ACTAGGGCCA AAGGGCATGG ACAAAATGCT TATTGACTCT
CTCGGCGATA TAACAATAAC AAATGATGGT GCCACTATTC TTGATGAAAT GGATGTTCAA
CACCCCATAG CTAAGTTACT AGTAGAAATT TCTAAATCTC AGGAAGAGGA GGCTGGCGAC
GGTACTACTA CAGCGGTTGT GCTAGCCGGC GCTTTACTTG AGGAAGCCGA GAAACTACTT
GAGAAAAACA TCCATCCAAC TGTAATAGTA AGCGGTTTTA AGAAGGCGCT AGATGTGGCC
ACAGAGCATC TACGTAAAGT TGCCGTTCCT GTAAGTAGGA CAGATGTAGA TACGCTGAAA
AAAATAGCTA TGACATCAAT GGGTGGGAAG ATTTCTGAAA CTGTAAAGGA GTATTTCGCT
GACTTAGCTG TAAAAGCGGT GTTACAAGTG GCAGAGGAGA GAAATGGGAA ATACTACGTC
GATCTTGACA ACATCCAGAT AGTTAAGAAG CATGGCGCAT CTCTCCTAGA TACACAACTT
GTTTATGGTG TAATAGTTGA TAAAGAAGTC GTTCACGCAG CAATGCCTAA GCGTGTTATA
AATGCCAAAA TAGCGTTACT TGATGCGCCA TTGGAGGTAG AGAAGCCGGA AATCGATGCT
GAAATTAGAA TTAGCGATCC ACAACAGATG AGAGCGTTTT TAGAAGAGGA AGAGAAAATC
CTCAAGGGCT ATGTCGACAA GCTTAAATCG CTTGGCGTAA CTGCGTTATT CACTACAAAG
GGCATTGACG ACATTGCTCA GTACTACTTA GCTAAAGCTG GCATATTAGC CGTGAGGAGA
GTAAAACGTA GTGACATAGA AAAATTAGTG AGAGCTACAG GCGGGAGACT AGTGACAAAT
ATTGAAGACT TAACAGAAGC CGACCTCGGC TTTGCGGGAC TTGTTGAGGA GAGACGTGTA
GGCGACGAGA AGATGGTGTT TGTAGAACAA TGTAAAAACC CAAGAGCAGT CTCGATTCTA
GTACGTGGAG GCTTTGAGAG ACTTGTCGAC GAAGCCGAGC GTAATCTTGA CGATGCTCTA
TCTGTTGTTG CCGATGTAGT TGAGGAGCCC TATATACTTC CTGCGGGCGG TGCGGCTGAG
ATAGAGGCTG CGAAAGCTGT TAGAGCCTTT GCAACAAAAG TGGGCGGAAG AGAACAATAT
GCTGTAGAGG CGTTTGCAAG AGCTCTTGAA GCCATACCTA AGGCTCTCGC CGAAAACGCC
GGGCTAGACC CCATAGACAT ACTGACTGAG TTGACGCACA AACACGAGCA GCCAGACGGT
TGGAGATACG GCCTTGACGT ATATCAAGGC AAGGTTGTAG ACATGATGGC TCTCGGCTTA
ATTGAGCCGT TGACTGTAAA GCTTAACGCG CTTAAAGTAG CTGTTGAAGC CGCGTCTATG
ATTTTGAGAA TAGACGAGAT AATCGCGGCA TCTAAATTAG AGAAGGAGAA AGAGGAGAAG
AAGGGAGAGG AAGAGAAGAA GGAAGAAAAG AAGGAATTTG ACTAA
 
Protein sequence
MSQAVLTQIG GVPVLVLKEG TQRAFGKEAL RLNIMIARAI AEVMRTTLGP KGMDKMLIDS 
LGDITITNDG ATILDEMDVQ HPIAKLLVEI SKSQEEEAGD GTTTAVVLAG ALLEEAEKLL
EKNIHPTVIV SGFKKALDVA TEHLRKVAVP VSRTDVDTLK KIAMTSMGGK ISETVKEYFA
DLAVKAVLQV AEERNGKYYV DLDNIQIVKK HGASLLDTQL VYGVIVDKEV VHAAMPKRVI
NAKIALLDAP LEVEKPEIDA EIRISDPQQM RAFLEEEEKI LKGYVDKLKS LGVTALFTTK
GIDDIAQYYL AKAGILAVRR VKRSDIEKLV RATGGRLVTN IEDLTEADLG FAGLVEERRV
GDEKMVFVEQ CKNPRAVSIL VRGGFERLVD EAERNLDDAL SVVADVVEEP YILPAGGAAE
IEAAKAVRAF ATKVGGREQY AVEAFARALE AIPKALAENA GLDPIDILTE LTHKHEQPDG
WRYGLDVYQG KVVDMMALGL IEPLTVKLNA LKVAVEAASM ILRIDEIIAA SKLEKEKEEK
KGEEEKKEEK KEFD