Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0958 |
Symbol | |
ID | 4618132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 851089 |
End bp | 852753 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639784056 |
Product | thermosome |
Protein accession | YP_930477 |
Protein GI | 119872470 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.301353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG CTGTATTGAC TCAAATAGGA GGAGTGCCAG TGCTTGTATT AAAGGAAGGT ACGCAGAGGG CTTTTGGCAA AGAGGCGCTT AGGCTAAATA TAATGATTGC AAGAGCTATA GCCGAAGTTA TGAGGACGAC ACTAGGGCCA AAGGGCATGG ACAAAATGCT TATTGACTCT CTCGGCGATA TAACAATAAC AAATGATGGT GCCACTATTC TTGATGAAAT GGATGTTCAA CACCCCATAG CTAAGTTACT AGTAGAAATT TCTAAATCTC AGGAAGAGGA GGCTGGCGAC GGTACTACTA CAGCGGTTGT GCTAGCCGGC GCTTTACTTG AGGAAGCCGA GAAACTACTT GAGAAAAACA TCCATCCAAC TGTAATAGTA AGCGGTTTTA AGAAGGCGCT AGATGTGGCC ACAGAGCATC TACGTAAAGT TGCCGTTCCT GTAAGTAGGA CAGATGTAGA TACGCTGAAA AAAATAGCTA TGACATCAAT GGGTGGGAAG ATTTCTGAAA CTGTAAAGGA GTATTTCGCT GACTTAGCTG TAAAAGCGGT GTTACAAGTG GCAGAGGAGA GAAATGGGAA ATACTACGTC GATCTTGACA ACATCCAGAT AGTTAAGAAG CATGGCGCAT CTCTCCTAGA TACACAACTT GTTTATGGTG TAATAGTTGA TAAAGAAGTC GTTCACGCAG CAATGCCTAA GCGTGTTATA AATGCCAAAA TAGCGTTACT TGATGCGCCA TTGGAGGTAG AGAAGCCGGA AATCGATGCT GAAATTAGAA TTAGCGATCC ACAACAGATG AGAGCGTTTT TAGAAGAGGA AGAGAAAATC CTCAAGGGCT ATGTCGACAA GCTTAAATCG CTTGGCGTAA CTGCGTTATT CACTACAAAG GGCATTGACG ACATTGCTCA GTACTACTTA GCTAAAGCTG GCATATTAGC CGTGAGGAGA GTAAAACGTA GTGACATAGA AAAATTAGTG AGAGCTACAG GCGGGAGACT AGTGACAAAT ATTGAAGACT TAACAGAAGC CGACCTCGGC TTTGCGGGAC TTGTTGAGGA GAGACGTGTA GGCGACGAGA AGATGGTGTT TGTAGAACAA TGTAAAAACC CAAGAGCAGT CTCGATTCTA GTACGTGGAG GCTTTGAGAG ACTTGTCGAC GAAGCCGAGC GTAATCTTGA CGATGCTCTA TCTGTTGTTG CCGATGTAGT TGAGGAGCCC TATATACTTC CTGCGGGCGG TGCGGCTGAG ATAGAGGCTG CGAAAGCTGT TAGAGCCTTT GCAACAAAAG TGGGCGGAAG AGAACAATAT GCTGTAGAGG CGTTTGCAAG AGCTCTTGAA GCCATACCTA AGGCTCTCGC CGAAAACGCC GGGCTAGACC CCATAGACAT ACTGACTGAG TTGACGCACA AACACGAGCA GCCAGACGGT TGGAGATACG GCCTTGACGT ATATCAAGGC AAGGTTGTAG ACATGATGGC TCTCGGCTTA ATTGAGCCGT TGACTGTAAA GCTTAACGCG CTTAAAGTAG CTGTTGAAGC CGCGTCTATG ATTTTGAGAA TAGACGAGAT AATCGCGGCA TCTAAATTAG AGAAGGAGAA AGAGGAGAAG AAGGGAGAGG AAGAGAAGAA GGAAGAAAAG AAGGAATTTG ACTAA
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Protein sequence | MSQAVLTQIG GVPVLVLKEG TQRAFGKEAL RLNIMIARAI AEVMRTTLGP KGMDKMLIDS LGDITITNDG ATILDEMDVQ HPIAKLLVEI SKSQEEEAGD GTTTAVVLAG ALLEEAEKLL EKNIHPTVIV SGFKKALDVA TEHLRKVAVP VSRTDVDTLK KIAMTSMGGK ISETVKEYFA DLAVKAVLQV AEERNGKYYV DLDNIQIVKK HGASLLDTQL VYGVIVDKEV VHAAMPKRVI NAKIALLDAP LEVEKPEIDA EIRISDPQQM RAFLEEEEKI LKGYVDKLKS LGVTALFTTK GIDDIAQYYL AKAGILAVRR VKRSDIEKLV RATGGRLVTN IEDLTEADLG FAGLVEERRV GDEKMVFVEQ CKNPRAVSIL VRGGFERLVD EAERNLDDAL SVVADVVEEP YILPAGGAAE IEAAKAVRAF ATKVGGREQY AVEAFARALE AIPKALAENA GLDPIDILTE LTHKHEQPDG WRYGLDVYQG KVVDMMALGL IEPLTVKLNA LKVAVEAASM ILRIDEIIAA SKLEKEKEEK KGEEEKKEEK KEFD
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