Gene Pisl_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0948 
Symbol 
ID4617157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp842754 
End bp843194 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content46% 
IMG OID639784046 
Producthypothetical protein 
Protein accessionYP_930467 
Protein GI119872460 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0468822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAGA AAGCGCCGCT TCCAACTCCA ATTCTAATAA TAGTAGTGGA GAATCACGGT 
GCGGTAGTCG GATGGCCCCT CGTAATACCT GGAGAGACCA CGCTTATCGC ACTGCCGTTT
TATAAAGACC GAAAGACTCT GGCACTTATA AGACAGAAAA AAGCGTTTTC TATAAATCTC
GTAAATGACG CTCAGAGGGC TGTTGAGATA TTTGGTAAGC CAGGCGAGAA AAAACTTGAG
AAATGGGGCA ATGTCGTTAA TTGTAAAGTT GCGCCTTGTT ACGCTTTGGG AGATGCGTCA
AGAGTAATAG AGTGTATATA CCGAGGGGAG TTTGGGATAA AAGATCATGT AGTAGTCCTC
TGCAGTGCTG TGGCAAGTTA TGGATGTGGC AAATTCACAA TGTGGGATCC CTGCGCTAAC
CTCCAGCTGC CGGCGGTATA A
 
Protein sequence
MCEKAPLPTP ILIIVVENHG AVVGWPLVIP GETTLIALPF YKDRKTLALI RQKKAFSINL 
VNDAQRAVEI FGKPGEKKLE KWGNVVNCKV APCYALGDAS RVIECIYRGE FGIKDHVVVL
CSAVASYGCG KFTMWDPCAN LQLPAV