| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0925 |
|---|
| Symbol | |
|---|
| ID | 4617687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 824187 |
|---|
| End bp | 824645 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639784023 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_930444 |
|---|
| Protein GI | 119872437 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.220033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTCC AGGTGATATA CGCTCCCTGG CGCTATAGGT ACATACAGAA TTTAGGAAGG
GACGAATGTT TCCTATGTAA AGCGGCTAAA GAAATCGAAA GAGACGACGA AAATTTAGTA
CCAGCGAGAG GGAGACACGT CTTTGCTATA CTCAATAAAT ACCCCTACAC TTGGGGCCAT
GTGATGGTGG CGCCGTATAG ACATATTTCA CAATTTGAAG AACTGGACTA CAACGAGTGG
GTTGAGATGA TTCAGATGGC GAAGAAATTG GTGCACGCCC TGAGAAAAGT CGTAGGGGCT
AGAGACTTTA TAATTGGGCT AAACATCGGC AGAGCAGCAG GCGCTGGGTT AGAGGGCCAT
CTACACCTCC ACATAATCCC CCGAGATAAG ATGGTGGAGG TTGAGGAGCT ATCTCAGGCT
CTTGTTAAAC TTACTAGAGA GTTGAGAGAG ACGTTATGA
|
|---|
| Protein sequence | MDFQVIYAPW RYRYIQNLGR DECFLCKAAK EIERDDENLV PARGRHVFAI LNKYPYTWGH
VMVAPYRHIS QFEELDYNEW VEMIQMAKKL VHALRKVVGA RDFIIGLNIG RAAGAGLEGH
LHLHIIPRDK MVEVEELSQA LVKLTRELRE TL
|
|---|
| |