Gene Pisl_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0923 
Symbol 
ID4617975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp822809 
End bp823150 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content43% 
IMG OID639784021 
ProductPilT domain-containing protein 
Protein accessionYP_930442 
Protein GI119872435 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.223217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTTG TACTTGATAC CTCCGCCCTA ATATACATAA TAGAACAAAG AATTGATGTA 
GAACAGCTAC TAGAACACGA AGTCTATATA CCGACAGCTG TTGAAGAGGA GCTAAGGCTT
TTAGCAACTA GAAATAGAAA AGCGCGTGTC GCCTTAGAAC TTCTACAGCT TCTTAGGCCA
AAGCGATATA ACAAAGAGAG ACCTGCCGAC AGAGCTGTGT TAGAAACAGC CCAAGAGCTT
GGGGCAGTTT TAGTGACGGG AGATTCTGCA CTTGTAAAAA AGGCGAGAGC TCTTGGTATT
CCTGTGGCAA AATTTCACAA AGGTCAGCTA GTCGTCTATT AG
 
Protein sequence
MKLVLDTSAL IYIIEQRIDV EQLLEHEVYI PTAVEEELRL LATRNRKARV ALELLQLLRP 
KRYNKERPAD RAVLETAQEL GAVLVTGDSA LVKKARALGI PVAKFHKGQL VVY