| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0922 |
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| Symbol | |
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| ID | 4617967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 822200 |
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| End bp | 822787 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639784020 |
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| Product | DNA-directed RNA polymerase subunit E' |
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| Protein accession | YP_930441 |
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| Protein GI | 119872434 |
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| COG category | [K] Transcription |
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| COG ID | [COG1095] DNA-directed RNA polymerase, subunit E' |
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| TIGRFAM ID | [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.188149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAACA TCGTGCCATT TAGATTAGTT GAGGCTGAGG ACTATGTTAG AATTCCGCCG
ACAGAATTTG GCAAACCTCT GGAAGATATT GCATTACAAC AGCTAAGGAG TAAGTACGAG
GGGAGGGTAT TAAGAGAGGT GGGTTATGTC GTAGCGGTTC TCACGGCAAA AGTAGGCCGC
GAGGGAAGGA TAGTATTTGG CGATGGGGGA ACCTACCATA GGGCCGTTTT TACAATGCTT
GCATATATGC CCCTAGATGG CGAAATTATA GAGGGTGTCG TAGAAAACGT CAGAGAGATG
GGGATGTTAG TGAGGATAGG GCCTATTCTT GGTTTTATAA ACAAAATACA TGTCATGGAC
GAACCTAACA TTTTCTTTGA CGCAAGTACA AAGAGCTACA TCGGAGAGAG GAGTAAAAGA
AAGATAAGTG TTGGCGACAT AGTAAGGGCG CGTATCACTG GTGTTAGCTT TACAACGCCT
AGAGAGGGGA CAGACCTACT TCTCCGTGTT ACATTAACAA TGCGCATGCC GGGGCTTGGC
AAGATGGAAT GGATTAAGGA GAAAAAACCG GCTGTCAAAA AGACATGA
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| Protein sequence | MPNIVPFRLV EAEDYVRIPP TEFGKPLEDI ALQQLRSKYE GRVLREVGYV VAVLTAKVGR
EGRIVFGDGG TYHRAVFTML AYMPLDGEII EGVVENVREM GMLVRIGPIL GFINKIHVMD
EPNIFFDAST KSYIGERSKR KISVGDIVRA RITGVSFTTP REGTDLLLRV TLTMRMPGLG
KMEWIKEKKP AVKKT
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