| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0917 |
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| Symbol | rpl10e |
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| ID | 4617614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 817919 |
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| End bp | 818467 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639784015 |
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| Product | 50S ribosomal protein L10e |
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| Protein accession | YP_930436 |
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| Protein GI | 119872429 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.617288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.240594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGTTA GACCTGCACG TTGTTATAGG CGGATAAAGG GACCCCCCTA TACGAGGGAG
GAGTATATAC ATGGTGCCCC AATGATCCAG ATACCTAAGT TCGATATGGG TGTCACAAGC
GCGGCCGCCA GGGCGGCGTT TTCAATGGTT GCAAAACTGG TAGTAGAGGA GAGGGGGCAG
ATCAGAATGC AGGCATTAGA GGCTGCTAGA CAGATGGCAT ATAAATACCT CTCTAAGTAT
GTTGGAGACG CCAATTACTA CCTCAGGCTC AATGTAGTTC CACACCATGT GCTAAGAGAA
AACAGAATGT TGGCCATGGC CGGCGCCGAC CGTCTACAGG AGGGGATGAG ACTAGCCTTT
GGCTCTCCCG CAGGGAGGGC CGCAAGAGTA GAGCCAGGGC AGGTGATATT TTATGCAGAA
TTTAGGCCGG AGCATATAGC CCATATAAAA GAGGCTTTGA GACGCGCCGC TTCTAAATTA
CCGTTGCCAA CACGCATAGT TATAGAGACT AAGGACGATG GAGGTGGTAA AACATTTACA
CAAAAGTAG
|
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| Protein sequence | MPVRPARCYR RIKGPPYTRE EYIHGAPMIQ IPKFDMGVTS AAARAAFSMV AKLVVEERGQ
IRMQALEAAR QMAYKYLSKY VGDANYYLRL NVVPHHVLRE NRMLAMAGAD RLQEGMRLAF
GSPAGRAARV EPGQVIFYAE FRPEHIAHIK EALRRAASKL PLPTRIVIET KDDGGGKTFT
QK
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