| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0916 |
|---|
| Symbol | |
|---|
| ID | 4616485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 817210 |
|---|
| End bp | 817944 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639784014 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_930435 |
|---|
| Protein GI | 119872428 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4879] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.323356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAAAAC ATTTACACAA AAGTAGAATT GAGACAGCCC TAGTCCTACT TGAGCGGGTT
CTCACAGGCG TTATAACCTC CCGCTCTGAC CTAGTAGCCG AGCTACAGAC ACTATATAGA
GAAAGAGGTA TTGAACCATT CCGCGGTCTC TCCAGAGAAG GGATTTATGA CAAAGAGATA
GCTACTGTAT ATCTAGTAGG AGTCCACGGC GTGGGAGTTC TCTCGCCAGG GGATTTCGAT
AATATATTCT ACATCGAGAA CAGATCTATG GAAGCATTAG AGATAGTAAA GTCTGTCACA
GAGATTCTGT CTCCAGAGTT GAAAGAGTTG CTTAGGAAAA AGACAGAAGA CATAAAGGGC
AAGTCGTGGG AAGATAAAGT ATTTAGAGTT TTACGGCTGG TATTTACGGG AACGATTCTT
GGGTATTACC CAGAGATGTT GCTTGTAAAA GCTATAAAGA CATATGAAAT AGCATATCCA
GAGCTCTCCG AACGTCTTAT CAACTATGCA GCATTTTACA GCGCGTATAA AATAGCCGAA
GATATAGCTC TTGGCAAAAT AAGAAGCCCT GAAGACCTAA AAATACAGAA ATATGCATAT
TGCCTAAAAC TCGGCTTTCA AAAGTGTAAA CCATCTGACA AATTAATAGC CGAAGTGGCC
ACTGCGGTGT ATAAAGTAAA CAAAACAACA CTTGTTAGAC TATTTGCTAA AGGCGTACTT
CCAAAACTTG AGTAA
|
|---|
| Protein sequence | MVKHLHKSRI ETALVLLERV LTGVITSRSD LVAELQTLYR ERGIEPFRGL SREGIYDKEI
ATVYLVGVHG VGVLSPGDFD NIFYIENRSM EALEIVKSVT EILSPELKEL LRKKTEDIKG
KSWEDKVFRV LRLVFTGTIL GYYPEMLLVK AIKTYEIAYP ELSERLINYA AFYSAYKIAE
DIALGKIRSP EDLKIQKYAY CLKLGFQKCK PSDKLIAEVA TAVYKVNKTT LVRLFAKGVL
PKLE
|
|---|
| |