Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0910 |
Symbol | rps13p |
ID | 4617766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 809912 |
End bp | 810373 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639784008 |
Product | 30S ribosomal protein S13P |
Protein accession | YP_930429 |
Protein GI | 119872422 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0099] Ribosomal protein S13 |
TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCAAG AGATACGCGC TATAGTACGT ATAGGGGATA CGGATTTAGA TGGTAATAAA CAAGTAGCTT ATTCATTGAC TAAGATAAGA GGCATAGGCA TCGCCACGGC TTACGCCATT TGTAGAAAAC TTGGCATAGA TCCACACGCC ATATTAGGCG CTTTAAGCGA GGAGCAGATA AATAAACTTG ACTGGGCTGT TAGAAATCTA CACGAGCTGG CCCCCGCTTG GTTTTTAAAC AGAAGGAAAG ATCCAGAGAC AGGTAAAGAC TTACACTTGA TTGGCGCAGA GTTAGTACTA GCGGCTAAAA GAGATGTAGA TCTTATGAAG AAGTTAAAGA GTTGGAAAGG CGTAAGACAC TCGCTAGGTC TTAAAGTCAG AGGCCAGAGG ACTGTGACTA CGGGTAGACT CGGCCCTGTG GCTGGCGTCA CTAAAAAGAA GGCGGCAGCC GGCGGTAAGT AA
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Protein sequence | MSQEIRAIVR IGDTDLDGNK QVAYSLTKIR GIGIATAYAI CRKLGIDPHA ILGALSEEQI NKLDWAVRNL HELAPAWFLN RRKDPETGKD LHLIGAELVL AAKRDVDLMK KLKSWKGVRH SLGLKVRGQR TVTTGRLGPV AGVTKKKAAA GGK
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